RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 C2orf78A6NCI8 922 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 ZNF233A6NK53 670 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 RPP40O75818 363 aaKnown RBP17.39■□□□□ 0.37
TRIM65-203ENST00000540812 CKMP06732 381 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 MAGEA11P43364 429 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
TRIM65-203ENST00000540812 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 ARL14EPQ8N8R7 260 aaPredicted RBP17.39■□□□□ 0.37
TRIM65-203ENST00000540812 HHIPQ96QV1 700 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 P2RY13Q9BPV8 354 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 ARRDC1-AS1Q9H2J1 176 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
TRIM65-203ENST00000540812 CHD8Q9HCK8 2581 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 SPAG17Q6Q759 2223 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
TRIM65-203ENST00000540812 ATG13O75143 517 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 TNNC2P02585 160 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 USP17L7P0C7H9 530 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 DRD1P21728 446 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 BDNFP23560 247 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 IFNAR2P48551 515 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 USP46P62068 366 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 AMPD2Q01433 879 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 STK38Q15208 465 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 SF3A2Q15428 464 aaKnown RBP17.38■□□□□ 0.37
TRIM65-203ENST00000540812 E2F4Q16254 413 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 EML3Q32P44 896 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 CPA6Q8N4T0 437 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 LINC00301Q8NCQ3 95 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 RPLP0P6Q8NHW5 317 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 SH3RF2Q8TEC5 729 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
TRIM65-203ENST00000540812 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 KBTBD4Q9NVX7 518 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 MAGEC2Q9UBF1 373 aaPredicted RBP17.38■□□□□ 0.37
TRIM65-203ENST00000540812 CDH9Q9ULB4 789 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
TRIM65-203ENST00000540812 NME7Q9Y5B8 376 aa17.38■□□□□ 0.37
TRIM65-203ENST00000540812 CCDC163A0A0D9SF12 145 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 STX6O43752 255 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
TRIM65-203ENST00000540812 RAP1GAPP47736 663 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 DUOXA2Q1HG44 320 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 PPM1JQ5JR12 505 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 C4orf50Q6ZRC1 276 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 DPH6Q7L8W6 267 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 CD101Q93033 1021 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 MRPL45Q9BRJ2 306 aaKnown RBP17.37■□□□□ 0.37
TRIM65-203ENST00000540812 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 LINC00597Q9H2U6 94 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 ZSCAN16Q9H4T2 348 aaPredicted RBP17.37■□□□□ 0.37
TRIM65-203ENST00000540812 LAMA1P25391 3075 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 ANAPC1Q9H1A4 1944 aa17.37■□□□□ 0.37
TRIM65-203ENST00000540812 TGFB1I1O43294 461 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 EPN2O95208 641 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 ADRB1P08588 477 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 HDCP19113 662 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 GRIK1P39086 918 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 ZXDBP98169 803 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 CYP27A1Q02318 531 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 KCNB1Q14721 858 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 SURF1Q15526 300 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 STXBP4Q6ZWJ1 553 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 EPM2AIP1Q7L775 607 aaPredicted RBP17.36■□□□□ 0.37
TRIM65-203ENST00000540812 TRAPPC11Q7Z392 1133 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 WDR49Q8IV35 697 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 FSIP1Q8NA03 581 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 RDH13Q8NBN7 331 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 ATP2A3Q93084 1043 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 DHX58Q96C10 678 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 LOXL4Q96JB6 756 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 SPATA17Q96L03 361 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 SMOC1Q9H4F8 434 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 RXFP3Q9NSD7 469 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 TFIP11Q9UBB9 837 aaKnown RBP17.36■□□□□ 0.37
TRIM65-203ENST00000540812 ARHGAP26Q9UNA1 814 aa17.36■□□□□ 0.37
TRIM65-203ENST00000540812 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 ANTXRLA6NF34 631 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 SPTLC2O15270 562 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 EIF3DO15371 548 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRIM65-203ENST00000540812 CST3P01034 146 aaPredicted RBP17.35■□□□□ 0.37
TRIM65-203ENST00000540812 DLATP10515 647 aaKnown RBP17.35■□□□□ 0.37
TRIM65-203ENST00000540812 TCF3P15923 654 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 ASIC1P78348 528 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 FBXO43Q4G163 708 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 AASDHQ4L235 1098 aaPredicted RBP17.35■□□□□ 0.37
TRIM65-203ENST00000540812 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 VSTM1Q6UX27 236 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 DENND5BQ6ZUT9 1274 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 CAMKK1Q8N5S9 505 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 MYCBPAPQ8TBZ2 947 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 ZNF507Q8TCN5 953 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 PCED1BQ96HM7 432 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 MMS19Q96T76 1030 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 AGPAT3Q9NRZ7 376 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 EML5Q05BV3 1969 aa17.35■□□□□ 0.37
TRIM65-203ENST00000540812 DCLK1O15075 740 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms