RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TRIM66O15016 1216 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 AP1G2O75843 785 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 NOL4O94818 638 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 ATF6P18850 670 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 GPR15P49685 360 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 POLR2FP61218 127 aaKnown RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 SMAD2Q15796 467 aaKnown RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 PPP1R26Q5T8A7 1209 aaPredicted RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 CYP4A22Q5TCH4 519 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 SDHAF4Q5VUM1 108 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 ARHGAP17Q68EM7 881 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 FAM35AQ86V20 835 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 SHC3Q92529 594 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 SPATA17Q96L03 361 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 CEP295NLQ96MC4 621 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 NAA15Q9BXJ9 866 aaKnown RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 WDR6Q9NNW5 1121 aaKnown RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 HCFC1R1Q9NWW0 138 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 AJAP1Q9UKB5 411 aaPredicted RBP16.44■□□□□ 0.22
DDB1-218ENST00000540784 DAAM1Q9Y4D1 1078 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
DDB1-218ENST00000540784 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
DDB1-218ENST00000540784 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 F8VP50 259 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 TPM3P06753 285 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 FAM200BP0CF97 657 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 KCNQ1P51787 676 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 ZNF132P52740 706 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 CNGA2Q16280 664 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
DDB1-218ENST00000540784 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 PSMG2Q969U7 264 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 DUSP16Q9BY84 665 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 GANQ9H2C0 597 aa16.43■□□□□ 0.22
DDB1-218ENST00000540784 SLC38A8A6NNN8 435 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 ZNF197O14709 1029 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CYP26A1O43174 497 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CBFA2T2O43439 604 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 RHOP08100 348 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CSH1P0DML2 217 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CSH2P0DML3 217 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 BMP1P13497 986 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 FSHRP23945 695 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 MAP3K7CLP57077 242 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 SLC8A3P57103 927 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 BPIFB4P59827 614 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 NTHL1P78549 312 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 PTK2Q05397 1052 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 STILQ15468 1287 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
DDB1-218ENST00000540784 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDB1-218ENST00000540784 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 ANKRD52Q8NB46 1076 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 SMOQ99835 787 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 POMKQ9H5K3 350 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 DMAP1Q9NPF5 467 aaPredicted RBP16.42■□□□□ 0.22
DDB1-218ENST00000540784 NLRC4Q9NPP4 1024 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 ASAH2Q9NR71 780 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 KRT82Q9NSB4 513 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 HESX1Q9UBX0 185 aa16.42■□□□□ 0.22
DDB1-218ENST00000540784 MAGED2Q9UNF1 606 aaPredicted RBP16.42■□□□□ 0.22
DDB1-218ENST00000540784 EPHB6O15197 1021 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 MED7O43513 233 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 BEST1O76090 585 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 FGF19O95750 216 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 CALCAP01258 141 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 MYL4P12829 197 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 IL9P15248 144 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 GOLGA7BQ2TAP0 167 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 LCLAT1Q6UWP7 414 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 PHF7Q9BWX1 381 aaPredicted RBP16.41■□□□□ 0.22
DDB1-218ENST00000540784 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 XPO4Q9C0E2 1151 aaKnown RBP16.41■□□□□ 0.22
DDB1-218ENST00000540784 AVENQ9NQS1 362 aaPredicted RBP16.41■□□□□ 0.22
DDB1-218ENST00000540784 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 MRPS23Q9Y3D9 190 aaKnown RBP16.41■□□□□ 0.22
DDB1-218ENST00000540784 EYSQ5T1H1 3165 aa16.41■□□□□ 0.22
DDB1-218ENST00000540784 O00370 1275 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 THAP12O43422 761 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
DDB1-218ENST00000540784 NPR3P17342 541 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
DDB1-218ENST00000540784 GNA15P30679 374 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms