RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SPATA17Q96L03 361 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 XYLT2Q9H1B5 865 aa22.4■■□□□ 1.18
CHFR-217ENST00000540537 PRMT8Q9NR22 394 aaPredicted RBP22.4■■□□□ 1.18
CHFR-217ENST00000540537 RHOBTB3O94955 611 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 LMNAP02545 664 aaKnown RBP22.39■■□□□ 1.17
CHFR-217ENST00000540537 PRR29P0C7W0 189 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 BDNFP23560 247 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 DPYDQ12882 1025 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 MTAPQ13126 283 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 BIRC3Q13489 604 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 ZNF268Q14587 947 aaPredicted RBP22.39■■□□□ 1.17
CHFR-217ENST00000540537 MAMSTRQ6ZN01 415 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 KRBA2Q6ZNG9 492 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 OR6B3Q8NGW1 331 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 PCED1BQ96HM7 432 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 LMAN1LQ9HAT1 526 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 TDP1Q9NUW8 608 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 GTSE1Q9NYZ3 720 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 NME7Q9Y5B8 376 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 EP300Q09472 2414 aaPredicted RBP22.39■■□□□ 1.17
CHFR-217ENST00000540537 ANAPC1Q9H1A4 1944 aa22.39■■□□□ 1.17
CHFR-217ENST00000540537 SPECC1L-ADORA2AF8WAN1 911 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 CALUO43852 315 aaPredicted RBP22.38■■□□□ 1.17
CHFR-217ENST00000540537 CHRNB1P11230 501 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 CTHP32929 405 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 SOX9P48436 509 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 CYP27A1Q02318 531 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 MDH1BQ5I0G3 518 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 ADSSL1Q8N142 457 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 GOLPH3LQ9H4A5 285 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 NXF1Q9UBU9 619 aaKnown RBP22.38■■□□□ 1.17
CHFR-217ENST00000540537 TRAF3IP3Q9Y228 551 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 CCL26Q9Y258 94 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 PCDHGA2Q9Y5H1 932 aa22.38■■□□□ 1.17
CHFR-217ENST00000540537 WDR87Q6ZQQ6 2873 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 TRIM66O15016 1216 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 C4BPAP04003 597 aaKnown RBP22.37■■□□□ 1.17
CHFR-217ENST00000540537 PTPN1P18031 435 aaKnown RBP22.37■■□□□ 1.17
CHFR-217ENST00000540537 GRIK1P39086 918 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 NCOA4Q13772 614 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 LRRC32Q14392 662 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 BECN1Q14457 450 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 ZNF699Q32M78 642 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 ITPRIPL2Q3MIP1 535 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 TMC2Q8TDI7 906 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 NELL1Q92832 810 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 FAM83CQ9BQN1 747 aa22.37■■□□□ 1.17
CHFR-217ENST00000540537 OTOGLQ3ZCN5 2332 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 A8MXQ7 604 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 KINO60870 393 aaKnown RBP22.36■■□□□ 1.17
CHFR-217ENST00000540537 ZNF202O95125 648 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 ANXA13P27216 316 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 TNK2Q07912 1038 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 KCNB1Q14721 858 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 NFIL3Q16649 462 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 ZNF667Q5HYK9 610 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 TXNDC11Q6PKC3 985 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 TTC8Q8TAM2 541 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 DPEP3Q9H4B8 488 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 TRPC7Q9HCX4 862 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 GKN1Q9NS71 199 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 ZSCAN32Q9NX65 697 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 EHD2Q9NZN4 543 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 FRMD4BQ9Y2L6 1034 aa22.36■■□□□ 1.17
CHFR-217ENST00000540537 TRAV19A0A0A6YYK7 116 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 MAPK13O15264 365 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 VNN1O95497 513 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 USP17L7P0C7H9 530 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 FAM160A1Q05DH4 1040 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 PPP2R5DQ14738 602 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 ZACNQ401N2 412 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 DGKKQ5KSL6 1271 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 CEP135Q66GS9 1140 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 DENND5BQ6ZUT9 1274 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 ZBTB44Q8NCP5 570 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 B3GALNT2Q8NCR0 500 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 CCDC34Q96HJ3 373 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 C8orf48Q96LL4 319 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 TTLL2Q9BWV7 592 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 FAM126AQ9BYI3 521 aaPredicted RBP22.35■■□□□ 1.17
CHFR-217ENST00000540537 ELOVL4Q9GZR5 314 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 SMYD3Q9H7B4 428 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 GDPD2Q9HCC8 539 aa22.35■■□□□ 1.17
CHFR-217ENST00000540537 ZNF292O60281 2723 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 F8VP50 259 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 IKBKBO14920 756 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 PFKLP17858 780 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 CCR3P51677 355 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 NOP14P78316 857 aaKnown RBP22.34■■□□□ 1.17
CHFR-217ENST00000540537 DLG4P78352 724 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 GUF1Q8N442 669 aaKnown RBP22.34■■□□□ 1.17
CHFR-217ENST00000540537 RIN3Q8TB24 985 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 ATRIPQ8WXE1 791 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 HPS4Q9NQG7 708 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 GCNT4Q9P109 453 aa22.34■■□□□ 1.17
CHFR-217ENST00000540537 CLSTN1O94985 981 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 CKMP06732 381 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 TDGF1P13385 188 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 P4HA1P13674 534 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 PDE6CP51160 858 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms