RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 KRT3P12035 628 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 BFSP2Q13515 415 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 LRP8Q14114 963 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 KIF19Q2TAC6 998 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 CALN1Q9BXU9 219 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 EPS8L2Q9H6S3 715 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 SCAF8Q9UPN6 1271 aaKnown RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 PORP16435 677 aaPredicted RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 CLK3P49761 638 aaKnown RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 FAXCQ5TGI0 409 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 IFNEQ86WN2 208 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 M0R3G1 203 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 MATN2O00339 956 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 MAP3K6O95382 1288 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 PRKACBP22694 351 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 RPL10AP62906 217 aaKnown RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 GALNTL6Q49A17 601 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 WDR44Q5JSH3 913 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 FBXO36Q8NEA4 188 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 DEPDC7Q96QD5 511 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 HMGXB3Q12766 1538 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 K7EPI3 171 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 DDAH1O94760 285 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 WEE2P0C1S8 567 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 CASP4P49662 377 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 PACS1Q6VY07 963 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 GALNT6Q8NCL4 622 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 C11orf70Q9BRQ4 267 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 SLC39A3Q9BRY0 314 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 C6orf62Q9GZU0 229 aaPredicted RBP11.54□□□□□ -0.56
PBX1-212ENST00000540236 IRF2BPLQ9H1B7 796 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 SAR1AQ9NR31 198 aa11.54□□□□□ -0.56
PBX1-212ENST00000540236 BMP10O95393 424 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 ALDH4A1P30038 563 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
PBX1-212ENST00000540236 MTX3Q5HYI7 312 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 LRRN4Q8WUT4 740 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 MIR1-1HGQ9H1L0 117 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 GIN1Q9NXP7 522 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 GLI2P10070 1586 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SGPL1O95470 568 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 RRM1P23921 792 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CPNE8Q86YQ8 564 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SCAIQ8N9R8 606 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 EBF1Q9UH73 591 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CRTAMO95727 393 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CETPP11597 493 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 ALOX12P18054 663 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SMTNL2Q2TAL5 461 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 TTC27Q6P3X3 843 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 PCGF5Q86SE9 256 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CATSPER1Q8NEC5 780 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 BAP1Q92560 729 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SNX5Q9Y5X3 404 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 STAM2O75886 525 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 BMP3P12645 472 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
PBX1-212ENST00000540236 KCTD6Q8NC69 237 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CDRT15Q96T59 188 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
PBX1-212ENST00000540236 EFHD1Q9BUP0 239 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 SENP6Q9GZR1 1112 aaPredicted RBP11.53□□□□□ -0.56
PBX1-212ENST00000540236 C17orf75Q9HAS0 396 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
PBX1-212ENST00000540236 N6AMT1Q9Y5N5 214 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 TRIM49D1C9J1S8 452 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 NUDT17P0C025 328 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 NR1H2P55055 460 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 CENPCQ03188 943 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 RPS6KA2Q15349 733 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 FSCBQ5H9T9 825 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 IQGAP3Q86VI3 1631 aa11.53□□□□□ -0.56
PBX1-212ENST00000540236 PSMD12O00232 456 aaPredicted RBP11.52□□□□□ -0.56
PBX1-212ENST00000540236 MGEA5O60502 916 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 BCAP31P51572 246 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 CDO1Q16878 200 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 FUT11Q495W5 492 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.56
PBX1-212ENST00000540236 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.56
PBX1-212ENST00000540236 FNDC8Q8TC99 324 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 BORCS5Q969J3 196 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.56
PBX1-212ENST00000540236 SYNJ2BP-COX16A0A087WUM0 186 aa11.52□□□□□ -0.57
PBX1-212ENST00000540236 MIF4GDA9UHW6 222 aaKnown RBP11.52□□□□□ -0.57
PBX1-212ENST00000540236 EDF1O60869 148 aaKnown RBP11.52□□□□□ -0.57
PBX1-212ENST00000540236 ALADP13716 330 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms