RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 DDX47Q9H0S4 455 aaKnown RBP6.32□□□□□ -1.4
PTPRD-214ENST00000540109 DOLKQ9UPQ8 538 aa6.32□□□□□ -1.4
PTPRD-214ENST00000540109 GUCY1B2O75343 617 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SLITRK3O94933 977 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 CPA2P48052 419 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ECM1Q16610 540 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PARP6Q2NL67 630 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SNX30Q5VWJ9 437 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 CRLF3Q8IUI8 442 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SPICE1Q8N0Z3 855 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 GIPC3Q8TF64 312 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 LXNQ9BS40 222 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 GANQ9H2C0 597 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 HOXC10Q9NYD6 342 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SNX12Q9UMY4 172 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 EXOC1LA0A1B0GW35 172 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 H3BNX3 289 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PALMO75781 387 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 MYCLP1P12525 358 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PLS3P13797 630 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ZNF12P17014 697 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 RAB14P61106 215 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ASTE1Q2TB18 679 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TJAP1Q5JTD0 557 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PDPRQ8NCN5 879 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 HDAC2Q92769 488 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 CHP1Q99653 195 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 AGO4Q9HCK5 861 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SQORQ9Y6N5 450 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PNMA8CA0A1B0GUJ8 204 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 F8VZ95 297 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 MAP3K13O43283 966 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NBNO60934 754 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 B3GALNT1O75752 331 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PENKP01210 267 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ADSLP30566 484 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 C21orf59P57076 290 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 RAB25P57735 213 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NLRP11P59045 1033 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 MTMR1Q13613 665 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SNX17Q15036 470 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NAB2Q15742 525 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ZFP1Q6P2D0 407 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ENOSF1Q7L5Y1 443 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ZNF720Q7Z2F6 126 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 C14orf80Q86SX3 495 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TRIM69Q86WT6 500 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PEX5LQ8IYB4 626 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ZBTB8BQ8NAP8 495 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NSUN6Q8TEA1 469 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PLEKHG4BQ96PX9 1271 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 THTPAQ9BU02 230 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 REXO2Q9Y3B8 237 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 DAPK3O43293 454 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 HOXA13P31271 388 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 STAT3P40763 770 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 LAMC2Q13753 1193 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 LRRC41Q15345 812 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ODR4Q5SWX8 454 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TTC27Q6P3X3 843 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 C4orf22Q6V702 233 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 MTBPQ96DY7 904 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 C19orf60Q96EN9 201 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 FAXDC2Q96IV6 333 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ING2Q9H160 280 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 AGPAT5Q9NUQ2 364 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 AGTPBP1Q9UPW5 1226 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TOM1L1O75674 476 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 IDO1P14902 403 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ATXN3P54252 364 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 BACE1P56817 501 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 DNAJC3Q13217 504 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 LACTB2Q53H82 288 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 HABP4Q5JVS0 413 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 PADI6Q6TGC4 694 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NELFCDQ8IXH7 590 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SERPINB12Q96P63 405 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 TMEM39BQ9GZU3 492 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ISCUQ9H1K1 167 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 ALG13Q9NP73 1137 aaKnown RBP6.31□□□□□ -1.4
PTPRD-214ENST00000540109 NPHS2Q9NP85 383 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 DMAC2Q9NW81 257 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 WDR70Q9NW82 654 aa6.31□□□□□ -1.4
PTPRD-214ENST00000540109 SPDYE5A6NIY4 337 aa6.3□□□□□ -1.4
PTPRD-214ENST00000540109 GOLGA8RI6L899 631 aa6.3□□□□□ -1.4
PTPRD-214ENST00000540109 DNALI1O14645 258 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-214ENST00000540109 ADCY6O43306 1168 aa6.3□□□□□ -1.4
PTPRD-214ENST00000540109 PSAPP07602 524 aa6.3□□□□□ -1.4
PTPRD-214ENST00000540109 RPS6P62753 249 aaKnown RBP6.3□□□□□ -1.4
PTPRD-214ENST00000540109 OTUD4Q01804 1114 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms