RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CUL9Q8IWT3 2517 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 BDP1A6H8Y1 2624 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 COL4A2P08572 1712 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 LRRC10BA6NIK2 292 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 LGALS16A8MUM7 142 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 BECN2A8MW95 431 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 PES1O00541 588 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 XYLBO75191 536 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 TPM2P07951 284 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CCDC130P13994 396 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CYP2F1P24903 491 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 MTHFRP42898 656 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 TUFMP49411 452 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 GPR15P49685 360 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF132P52740 706 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CACNA2D1P54289 1103 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 RAD23BP54727 409 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 YWHAEP62258 255 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 KCNMA1Q12791 1236 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 SUZ12Q15022 739 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 MGAT5BQ3V5L5 792 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF394Q53GI3 561 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 GJB7Q6PEY0 223 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 PAQR9Q6ZVX9 377 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 RRAGAQ7L523 313 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 FUKQ8N0W3 1084 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC4A11Q8NBS3 891 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 NECTIN4Q96NY8 510 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 NT5C1AQ9BXI3 368 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 B3GNT5Q9BYG0 378 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF518BQ9C0D4 1074 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 TSPY26PQ9H489 355 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 WDR6Q9NNW5 1121 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 RYDENQ9NUL5 291 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM49BQ9NUQ9 324 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 HCFC1R1Q9NWW0 138 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CEP72Q9P209 647 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 DNMT3BQ9UBC3 853 aaKnown RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 AJAP1Q9UKB5 411 aaPredicted RBP7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM50BQ9Y247 325 aa7.42□□□□□ -1.22
LPCAT3-209ENST00000540060 CLDN5O00501 218 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 RHOP08100 348 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 BMP1P13497 986 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 TRIM21P19474 475 aaKnown RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 CDK11BP21127 795 aaKnown RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 BDNFP23560 247 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ALDH1A3P47895 512 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 EPHB3P54753 998 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 EPHA5P54756 1037 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 NTHL1P78549 312 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PABPC1LQ4VXU2 614 aaKnown RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 TJAP1Q5JTD0 557 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PRSS36Q5K4E3 855 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ATAT1Q5SQI0 421 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 TMEM270Q6UE05 265 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 VSTM1Q6UX27 236 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 GRASPQ7Z6J2 395 aaPredicted RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 TMC8Q8IU68 726 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ELMOD1Q8N336 334 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 C12orf29Q8N999 325 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 STKLD1Q8NE28 680 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC2A14Q8TDB8 520 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 SHC3Q92529 594 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 KHSRPQ92945 711 aaKnown RBP eCLIP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PSMG2Q969U7 264 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 SMARCD1Q96GM5 515 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 TMEM176AQ96HP8 235 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM81BQ96LP2 452 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ERGIC2Q96RQ1 377 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 HNRNPABQ99729 332 aaKnown RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PHF7Q9BWX1 381 aaPredicted RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 LRRC3Q9BY71 257 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 GANQ9H2C0 597 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PIDD1Q9HB75 910 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 CSNK1G1Q9HCP0 422 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 UBE2TQ9NPD8 197 aaPredicted RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PLCB1Q9NQ66 1216 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 KRT82Q9NSB4 513 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 PRKAG3Q9UGI9 489 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 CNTN6Q9UQ52 1028 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 SIK3Q9Y2K2 1263 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ASB3Q9Y575 518 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 ATP8B3O60423 1300 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 COL4A3Q01955 1670 aa7.41□□□□□ -1.22
LPCAT3-209ENST00000540060 A0A1B0GTH6 734 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 F8VP50 259 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 GOLGA6L19H0YKK7 550 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 RNF225M0QZC1 329 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 NRG2O14511 850 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 TRIM66O15016 1216 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms