RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PPP1R2P3Q6NXS1 205 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 PALB2Q86YC2 1186 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 MYLK4Q86YV6 388 aaPredicted RBP10.46□□□□□ -0.74
TRAF1-202ENST00000540010 FBXL18Q96ME1 805 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 NDE1Q9NXR1 346 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 CHMP2BQ9UQN3 213 aa10.46□□□□□ -0.74
TRAF1-202ENST00000540010 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.74
TRAF1-202ENST00000540010 A0A0A6YYK5 440 aaPredicted RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CSDE1O75534 798 aaKnown RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 ZWINTO95229 277 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 MYBL1P10243 752 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 PPM1FP49593 454 aaPredicted RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 IFI35P80217 286 aaPredicted RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 IL1RL1Q01638 556 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 BIRC2Q13490 618 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 NCOA4Q13772 614 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TMEM63BQ5T3F8 832 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 ATF7IP2Q5U623 682 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 LVRNQ6Q4G3 990 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 LCA5Q86VQ0 697 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 FAM71AQ8IYT1 594 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 OR6J1Q8NGC5 347 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 EPS8L1Q8TE68 723 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CAVIN3Q969G5 261 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 ARHGEF26Q96DR7 871 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 VTA1Q9NP79 307 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 HAO1Q9UJM8 370 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 PPME1Q9Y570 386 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 LOXHD1Q8IVV2 1947 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 BTNL10A8MVZ5 291 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TRADDQ15628 312 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TTMPQ5BVD1 217 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 PLEKHH3Q7Z736 793 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 SHC3Q92529 594 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 MCEEQ96PE7 176 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CGRRF1Q99675 332 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 GPR88Q9GZN0 384 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 PARVAQ9NVD7 372 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 A0A0B4J269 797 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 OGTO15294 1046 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 MAP3K6O95382 1288 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CALCAP01258 141 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 LGALS2P05162 132 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 KRT3P12035 628 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 KRT10P13645 584 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 EEF1B2P24534 225 aaKnown RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 EIF3EP60228 445 aaKnown RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 COPS2P61201 443 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 KLC1Q07866 573 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
TRAF1-202ENST00000540010 ZPBP2Q6X784 338 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 CCNYL1Q8N7R7 359 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 THTPAQ9BU02 230 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 TSSK1BQ9BXA7 367 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 MYH10P35580 1976 aa10.45□□□□□ -0.74
TRAF1-202ENST00000540010 LOC100653049A0A140TA62 436 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 M0QYV0 167 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZC3H11AO75152 810 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 GRAP2O75791 330 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 KRT34O76011 436 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 KRT7P08729 469 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CCND1P24385 295 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 AARSP49588 968 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF157P51786 506 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ATXN3P54252 364 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF844Q08AG5 666 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 MOGSQ13724 837 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SURF1Q15526 300 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TDRD10Q5VZ19 366 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 GPR142Q7Z601 462 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 EXT2Q93063 718 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZSWIM1Q9BR11 485 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SHCBP1LQ9BZQ2 653 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 FAM49AQ9H0Q0 323 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CDC42EP4Q9H3Q1 356 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 RBBP6Q7Z6E9 1792 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 E2F8A0AVK6 867 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SOCS7O14512 581 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TYK2P29597 1187 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SESN2P58004 480 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 OCRLQ01968 901 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 DUOXA2Q1HG44 320 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ACTRT1Q8TDG2 376 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 HELQQ8TDG4 1101 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ACAP3Q96P50 834 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CCDC68Q9H2F9 335 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SNX25Q9H3E2 840 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 DLGAP2Q9P1A6 1054 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 KLHL8Q9P2G9 620 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 MYH9P35579 1960 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 KIAA1217Q5T5P2 1943 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 B2RBV5 119 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ASAP2O43150 1006 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TNFSF9P41273 254 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms