RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ZMYM5Q9UJ78 669 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 NDRG2Q9UN36 371 aaKnown RBP17.92■□□□□ 0.46
DDB1-215ENST00000539712 MAPK8IP1Q9UQF2 711 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 FANCMQ8IYD8 2048 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 GREB1Q4ZG55 1949 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 OTOGLQ3ZCN5 2332 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 KIF26AQ9ULI4 1882 aaPredicted RBP17.91■□□□□ 0.46
DDB1-215ENST00000539712 DPYSL4O14531 572 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 CHRNB1P11230 501 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 PTPN1P18031 435 aaKnown RBP17.91■□□□□ 0.46
DDB1-215ENST00000539712 DDX6P26196 483 aaKnown RBP eCLIP17.91■□□□□ 0.46
DDB1-215ENST00000539712 AP3M2P53677 418 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 CACNA2D1P54289 1103 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 CDH8P55286 799 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 USP46P62068 366 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 MTAPQ13126 283 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 TRPC3Q13507 836 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 NCOA4Q13772 614 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 KCNB1Q14721 858 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 ZACNQ401N2 412 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 MDH1BQ5I0G3 518 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 VSTM1Q6UX27 236 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 MAMSTRQ6ZN01 415 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 FMR1NBQ8N0W7 255 aaPredicted RBP17.91■□□□□ 0.46
DDB1-215ENST00000539712 OR6B3Q8NGW1 331 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 TMC2Q8TDI7 906 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 NELL1Q92832 810 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 SYAP1Q96A49 352 aaPredicted RBP17.91■□□□□ 0.46
DDB1-215ENST00000539712 CHFRQ96EP1 664 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 SDCBP2Q9H190 292 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 CHRDQ9H2X0 955 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 NXF1Q9UBU9 619 aaKnown RBP17.91■□□□□ 0.46
DDB1-215ENST00000539712 FBXO4Q9UKT5 387 aa17.91■□□□□ 0.46
DDB1-215ENST00000539712 OTOL1A6NHN0 477 aaPredicted RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 NCAM2O15394 837 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 AKAP3O75969 853 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 CTHP32929 405 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 MCCD1P59942 119 aaPredicted RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 TNNC1P63316 161 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 CYP27A1Q02318 531 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 GAS6Q14393 721 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 MAPRE1Q15691 268 aaKnown RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 NFIL3Q16649 462 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 ZNF528Q3MIS6 628 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 ZCWPW2Q504Y3 356 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 GUF1Q8N442 669 aaKnown RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 TTC8Q8TAM2 541 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 CSGALNACT1Q8TDX6 532 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 MRPS31Q92665 395 aaKnown RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 CYP2S1Q96SQ9 504 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 C8orf33Q9H7E9 229 aaPredicted RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 LMAN1LQ9HAT1 526 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 PRMT8Q9NR22 394 aaPredicted RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 TDP1Q9NUW8 608 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
DDB1-215ENST00000539712 UXTQ9UBK9 157 aaPredicted RBP17.9■□□□□ 0.46
DDB1-215ENST00000539712 SPECC1L-ADORA2AF8WAN1 911 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 IKBKBO14920 756 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 LAMTOR5O43504 91 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 PHACTR2O75167 634 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 TDGF1P13385 188 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 AVPR1AP37288 418 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 RAP1GAPP47736 663 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 BIRC3Q13489 604 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
DDB1-215ENST00000539712 PAQR9Q6ZVX9 377 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 SV2AQ7L0J3 742 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 CEP295NLQ96MC4 621 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 TTLL2Q9BWV7 592 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 ZNF518BQ9C0D4 1074 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 HPS4Q9NQG7 708 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 ANAPC1Q9H1A4 1944 aa17.89■□□□□ 0.45
DDB1-215ENST00000539712 C2orf78A6NCI8 922 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 A8MXQ7 604 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 F8VP50 259 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 CLDN5O00501 218 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 MAPK13O15264 365 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
DDB1-215ENST00000539712 GRIK1P39086 918 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 KPNA1P52294 538 aaPredicted RBP17.88■□□□□ 0.45
DDB1-215ENST00000539712 PLCB2Q00722 1185 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 CSTF1Q05048 431 aaKnown RBP17.88■□□□□ 0.45
DDB1-215ENST00000539712 ZNF699Q32M78 642 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 CEP135Q66GS9 1140 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 TSSK4Q6SA08 328 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 RALGPS2Q86X27 583 aaPredicted RBP17.88■□□□□ 0.45
DDB1-215ENST00000539712 B3GALNT2Q8NCR0 500 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 MSANTD3Q96H12 275 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 C8orf48Q96LL4 319 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 SEMA4AQ9H3S1 761 aa17.88■□□□□ 0.45
DDB1-215ENST00000539712 RBM12Q9NTZ6 932 aaKnown RBP17.88■□□□□ 0.45
DDB1-215ENST00000539712 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
DDB1-215ENST00000539712 NR2F2P24468 414 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 NOP14P78316 857 aaKnown RBP17.87■□□□□ 0.45
DDB1-215ENST00000539712 ZXDBP98169 803 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms