RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZBTB44Q8NCP5 570 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 PLEKHO2Q8TD55 490 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 ATRIPQ8WXE1 791 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 SYAP1Q96A49 352 aaPredicted RBP23.72■■□□□ 1.39
SCARB1-206ENST00000539320 TRPC7Q9HCX4 862 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 TDP1Q9NUW8 608 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 NME7Q9Y5B8 376 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 PHACTR2O75167 634 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 FAM163BP0C2L3 166 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 GNL1P36915 607 aaPredicted RBP23.71■■□□□ 1.39
SCARB1-206ENST00000539320 PPP2R5DQ14738 602 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 MDH1BQ5I0G3 518 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 SLC9A9Q8IVB4 645 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 SUMF1Q8NBK3 374 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 OR6B3Q8NGW1 331 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 MYCBPAPQ8TBZ2 947 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 PCED1BQ96HM7 432 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 SPATA17Q96L03 361 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 CEP295NLQ96MC4 621 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 HINFPQ9BQA5 517 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 FAM126AQ9BYI3 521 aaPredicted RBP23.71■■□□□ 1.39
SCARB1-206ENST00000539320 XYLT2Q9H1B5 865 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 KCTD10Q9H3F6 313 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 RBM12Q9NTZ6 932 aaKnown RBP23.71■■□□□ 1.39
SCARB1-206ENST00000539320 DMAC2Q9NW81 257 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 ATP6V1DQ9Y5K8 247 aa23.71■■□□□ 1.39
SCARB1-206ENST00000539320 FAM237AA0A1B0GTK4 181 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 LRRIQ3A6PVS8 624 aaPredicted RBP23.7■■□□□ 1.38
SCARB1-206ENST00000539320 CLSTN1O94985 981 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 RPN1P04843 607 aaKnown RBP23.7■■□□□ 1.38
SCARB1-206ENST00000539320 TDGF1P13385 188 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 ANXA13P27216 316 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 GRIK1P39086 918 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 AP3M2P53677 418 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 GAS6Q14393 721 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 PON2Q15165 354 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 WDR44Q5JSH3 913 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 DGKKQ5KSL6 1271 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 TDRD10Q5VZ19 366 aaKnown RBP23.7■■□□□ 1.38
SCARB1-206ENST00000539320 FSIP1Q8NA03 581 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 RIN3Q8TB24 985 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 PARD3BQ8TEW8 1205 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 FAM83CQ9BQN1 747 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 VRTNQ9H8Y1 702 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 HPS4Q9NQG7 708 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 GKN1Q9NS71 199 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 NXF1Q9UBU9 619 aaKnown RBP23.7■■□□□ 1.38
SCARB1-206ENST00000539320 GREB1Q4ZG55 1949 aa23.7■■□□□ 1.38
SCARB1-206ENST00000539320 TRAV19A0A0A6YYK7 116 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 PDXKO00764 312 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 TRIM66O15016 1216 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 LILRB5O75023 590 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 NR3C1P04150 777 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 CKMP06732 381 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 NDUFA8P51970 172 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 FAM160A1Q05DH4 1040 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 USP4Q13107 963 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 ZNF699Q32M78 642 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 CC2D1AQ6P1N0 951 aaPredicted RBP23.69■■□□□ 1.38
SCARB1-206ENST00000539320 Q6ZS52 159 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 TMEM174Q8WUU8 243 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 RUBCNQ92622 972 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 CCDC47Q96A33 483 aaKnown RBP23.69■■□□□ 1.38
SCARB1-206ENST00000539320 SCAND2PQ9GZW5 306 aaPredicted RBP23.69■■□□□ 1.38
SCARB1-206ENST00000539320 ANAPC1Q9H1A4 1944 aa23.69■■□□□ 1.38
SCARB1-206ENST00000539320 A8MXQ7 604 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 USP17L7P0C7H9 530 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 PRR29P0C7W0 189 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 CLDN10P78369 228 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 SATB1Q01826 763 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 MTF1Q14872 753 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 TRIM68Q6AZZ1 485 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 DENND5BQ6ZUT9 1274 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 SPEM1Q8N4L4 309 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 ELOVL4Q9GZR5 314 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 DPEP3Q9H4B8 488 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 EBF3Q9H4W6 596 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 SMYD3Q9H7B4 428 aa23.68■■□□□ 1.38
SCARB1-206ENST00000539320 SMG5Q9UPR3 1016 aaKnown RBP23.68■■□□□ 1.38
SCARB1-206ENST00000539320 ZNF292O60281 2723 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 A0A1W2PQ27 194 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 A0A1W2PQ64 194 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 A0A1W2PQD8 194 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 KIF20AO95235 890 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 PTPN1P18031 435 aaKnown RBP23.67■■□□□ 1.38
SCARB1-206ENST00000539320 CXCL12P48061 93 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 RUNX3Q13761 415 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 NCOA4Q13772 614 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 CCINQ13939 588 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 KCNB1Q14721 858 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 PDGFRLQ15198 375 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 ZNF77Q15935 545 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 ZNF667Q5HYK9 610 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 B3GALNT2Q8NCR0 500 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 C8orf48Q96LL4 319 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 SLC22A12Q96S37 553 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 TTLL2Q9BWV7 592 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 EPC1Q9H2F5 836 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 EHD2Q9NZN4 543 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 GCNT4Q9P109 453 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms