RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PKNOX2Q96KN3 472 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 KLHL32Q96NJ5 620 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 IMPG2Q9BZV3 1241 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 QRSL1Q9H0R6 528 aaKnown RBP2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 GREM2Q9H772 168 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 RALGAPBQ86X10 1494 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 NPHP4O75161 1426 aaPredicted RBP2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 NCOA3Q9Y6Q9 1424 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 USP32Q8NFA0 1604 aa2.49□□□□□ -2.01
CBX3P4-201ENST00000538909 CRYBG1Q9Y4K1 1723 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 RPGRIP1LQ68CZ1 1315 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 USP54Q70EL1 1684 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 IFITM10A6NMD0 228 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ENDOD1O94919 500 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 PDHA1P08559 390 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 PSG1P11464 419 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 CYP19A1P11511 503 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ATP2B1P20020 1258 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 DDCP20711 480 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 GTF2F1P35269 517 aaKnown RBP eCLIP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ADCYAP1R1P41586 468 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 LSSP48449 732 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 EEFSECP57772 596 aaKnown RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 CYP4F2P78329 520 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 HTRA4P83105 476 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 PCBP1Q15365 356 aaKnown RBP eCLIP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 FSCN1Q16658 493 aaKnown RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 C21orf62-AS1Q17RA5 79 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 AARS2Q5JTZ9 985 aaKnown RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 GJC2Q5T442 439 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 GFI1BQ5VTD9 330 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 CNNM4Q6P4Q7 775 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 SLC30A10Q6XR72 485 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ZNF804AQ7Z570 1209 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 RFX6Q8HWS3 928 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 NLGN4YQ8NFZ3 816 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 CYP2W1Q8TAV3 490 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 KLHDC4Q8TBB5 520 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 NR4A3Q92570 626 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 SLC5A5Q92911 643 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 FATE1Q969F0 183 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 RAX2Q96IS3 184 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 RITA1Q96K30 269 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 LMLNQ96KR4 655 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 MMS19Q96T76 1030 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ADI1Q9BV57 179 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 ACE2Q9BYF1 805 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 C11orf54Q9H0W9 315 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 TOPORSQ9NS56 1045 aaPredicted RBP2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 CDC42BPGQ6DT37 1551 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 NRKQ7Z2Y5 1582 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 FMN2Q9NZ56 1722 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 METP08581 1390 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 SBNO2Q9Y2G9 1366 aa2.48□□□□□ -2.01
CBX3P4-201ENST00000538909 LRRC7Q96NW7 1537 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 MYOM1P52179 1685 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ARID4BQ4LE39 1312 aaPredicted RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ADGRF5Q8IZF2 1346 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 NHSL1Q5SYE7 1610 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 C4orf47A7E2U8 309 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 PRSS47A8MTI9 375 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 FCHO1O14526 889 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 NXPH3O95157 252 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 FKBP9O95302 570 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 SBK3P0C264 359 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ENPP1P22413 925 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 HOXD9P28356 352 aaPredicted RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 CYP2C18P33260 490 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ALDH9A1P49189 494 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 NDUFV1P49821 464 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 HOXA4Q00056 320 aaPredicted RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 TWIST1Q15672 202 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 SEPT7Q16181 437 aaKnown RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ZNF549Q6P9A3 640 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 FKBP9P1Q75LS8 142 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 TMPRSS9Q7Z410 1059 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 RASSF3Q86WH2 238 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ADHFE1Q8IWW8 467 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 DCBLD1Q8N8Z6 715 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 AUTS2Q8WXX7 1259 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 CUL5Q93034 780 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 FAM118BQ9BPY3 351 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 TANGO6Q9C0B7 1094 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 IFT122Q9HBG6 1241 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 POT1Q9NUX5 634 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 SCOCQ9UIL1 159 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ZBTB21Q9ULJ3 1066 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 SLC45A2Q9UMX9 530 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 SCAF8Q9UPN6 1271 aaKnown RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 DCCP43146 1447 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 FAM135BQ49AJ0 1406 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 TRPM3Q9HCF6 1732 aaPredicted RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 MARF1Q9Y4F3 1742 aaKnown RBP2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 ABCC11Q96J66 1382 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 TULP4Q9NRJ4 1543 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 QRICH2Q9H0J4 1663 aa2.47□□□□□ -2.01
CBX3P4-201ENST00000538909 AHDC1Q5TGY3 1603 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ATP7BP35670 1465 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 MYBBP1AQ9BQG0 1328 aaKnown RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 EP400Q96L91 3159 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms