RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ATF2P15336 505 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 PKDCCQ504Y2 493 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 RBM23Q86U06 439 aaKnown RBP24.89■■□□□ 1.57
TMEM260-202ENST00000538838 ANKRD52Q8NB46 1076 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 C2orf15Q8WU43 125 aaKnown RBP24.89■■□□□ 1.57
TMEM260-202ENST00000538838 PCDHB18PQ96TA0 734 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 BAG1Q99933 345 aaPredicted RBP24.89■■□□□ 1.57
TMEM260-202ENST00000538838 SLC27A5Q9Y2P5 690 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 DDX3XO00571 662 aaKnown RBP eCLIP24.88■■□□□ 1.57
TMEM260-202ENST00000538838 SEC24AO95486 1093 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 SPATA31D3P0C874 917 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 TNFAIP3P21580 790 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 CLCN4P51793 760 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 BCAT1P54687 386 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 DUSP4Q13115 394 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 MAPK8IP2Q13387 824 aaPredicted RBP24.88■■□□□ 1.57
TMEM260-202ENST00000538838 CYP26C1Q6V0L0 522 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 CLEC20AQ6ZU45 233 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 SPATA31D4Q6ZUB0 917 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 LRRC8AQ8IWT6 810 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 SECISBP2LQ93073 1101 aaKnown RBP24.88■■□□□ 1.57
TMEM260-202ENST00000538838 NHEJ1Q9H9Q4 299 aaPredicted RBP24.88■■□□□ 1.57
TMEM260-202ENST00000538838 ABCB6Q9NP58 842 aa24.88■■□□□ 1.57
TMEM260-202ENST00000538838 SSU72P8A0A1W2PR75 194 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 SOWAHDA6NJG2 315 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 SOAT2O75908 522 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 BEST1O76090 585 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 GLUD1P00367 558 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 NPR3P17342 541 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 PDE4CQ08493 712 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 BST2Q10589 180 aaKnown RBP24.87■■□□□ 1.57
TMEM260-202ENST00000538838 C1orf131Q8NDD1 294 aaKnown RBP24.87■■□□□ 1.57
TMEM260-202ENST00000538838 SEPT5Q99719 369 aaPredicted RBP24.87■■□□□ 1.57
TMEM260-202ENST00000538838 SMOQ99835 787 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.87■■□□□ 1.57
TMEM260-202ENST00000538838 DUSP16Q9BY84 665 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 DEF6Q9H4E7 631 aa24.87■■□□□ 1.57
TMEM260-202ENST00000538838 TULP2O00295 520 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 MAP3K7CLP57077 242 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 MGAT5BQ3V5L5 792 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 LILRA6Q6PI73 481 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 SCN4BQ8IWT1 228 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 ZMIZ2Q8NF64 920 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 KCNK16Q96T55 309 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 CYP4F11Q9HBI6 524 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 ADAMTS1Q9UHI8 967 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 FBXW11Q9UKB1 542 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 GREB1Q4ZG55 1949 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 REV3LO60673 3130 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 F8VP50 259 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 HAPLN1P10915 354 aaPredicted RBP24.86■■□□□ 1.57
TMEM260-202ENST00000538838 GPD2P43304 727 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 MAGEA11P43364 429 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 NRIP1P48552 1158 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 GPR15P49685 360 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 NOMO3P69849 1222 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 ASTE1Q2TB18 679 aaPredicted RBP24.86■■□□□ 1.57
TMEM260-202ENST00000538838 NAA35Q5VZE5 725 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 VPS36Q86VN1 386 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 TMTC1Q8IUR5 882 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 WDTC1Q8N5D0 677 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 CCDC42Q96M95 316 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 LHX5Q9H2C1 402 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 TLE6Q9H808 572 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 DMAP1Q9NPF5 467 aaPredicted RBP24.86■■□□□ 1.57
TMEM260-202ENST00000538838 CYTH4Q9UIA0 394 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 CEP83Q9Y592 693 aa24.86■■□□□ 1.57
TMEM260-202ENST00000538838 MYO16Q9Y6X6 1858 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 A0A087X0T9 212 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 CYP1A1P04798 512 aaPredicted RBP24.85■■□□□ 1.57
TMEM260-202ENST00000538838 FAM228BP0C875 321 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 GRIK1P39086 918 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 KIF11P52732 1056 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 MTF1Q14872 753 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 DUSP6Q16828 381 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 CLEC16AQ2KHT3 1053 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 HABP4Q5JVS0 413 aaKnown RBP24.85■■□□□ 1.57
TMEM260-202ENST00000538838 VSTM1Q6UX27 236 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 TRIM72Q6ZMU5 477 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 SLC30A5Q8TAD4 765 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 NSUN3Q9H649 340 aaKnown RBP24.85■■□□□ 1.57
TMEM260-202ENST00000538838 CSNK1G1Q9HCP0 422 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 SPTLC3Q9NUV7 552 aa24.85■■□□□ 1.57
TMEM260-202ENST00000538838 PRRG1O14668 218 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 AKR1B10O60218 316 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 LSM8O95777 96 aaKnown RBP24.84■■□□□ 1.57
TMEM260-202ENST00000538838 SETSIPP0DME0 302 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 EPCAMP16422 314 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 ELF1P32519 619 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 CDH5P33151 784 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-202ENST00000538838 CCZ1BP86790 482 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 CCZ1P86791 482 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-202ENST00000538838 ADGRE1Q14246 886 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 DDR2Q16832 855 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 TMEM35BQ8NCS4 154 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 KREMEN2Q8NCW0 462 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 STKLD1Q8NE28 680 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 SLC22A17Q8WUG5 538 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 TAS2R14Q9NYV8 317 aa24.84■■□□□ 1.57
TMEM260-202ENST00000538838 YIPF1Q9Y548 306 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms