RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KCNJ1P48048 391 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 EFTUD2Q15029 972 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■■□□ 14.6
USP3-203ENST00000538686 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 CACTIN-AS1Q8N1I8 211 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ZCCHC9Q8N567 271 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 POU5F2Q8N7G0 328 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A7Q9HAW7 530 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A10Q9HAW8 530 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A8Q9HAW9 530 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 PSMD12O00232 456 aaPredicted RBP12.96□□□□□ -0.33
USP3-203ENST00000538686 LDHCP07864 332 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 SERPINA6P08185 405 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 ACTN1P12814 892 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 PLS3P13797 630 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 SLC9A1P19634 815 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 MZF1P28698 734 aaPredicted RBP12.96□□□□□ -0.33
USP3-203ENST00000538686 PTK7Q13308 1070 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 TTC30AQ86WT1 665 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 DNAAF5Q86Y56 855 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 FAM20CQ8IXL6 584 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 CCDC33Q8N5R6 958 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.33
USP3-203ENST00000538686 CCDC106Q9BWC9 280 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 LIN28AQ9H9Z2 209 aaKnown RBP12.96□□□□□ -0.33
USP3-203ENST00000538686 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 MYRFQ9Y2G1 1151 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 IKBKGQ9Y6K9 419 aa12.96□□□□□ -0.33
USP3-203ENST00000538686 TJP1Q07157 1748 aa12.96□□□□□ -0.34
USP3-203ENST00000538686 C5P01031 1676 aa12.96□□□□□ -0.34
USP3-203ENST00000538686 POC1B-GALNT4F8VUJ3 575 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 GOLGA8MH3BSY2 632 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 FSCN2O14926 492 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ABCB4P21439 1286 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 PRKACBP22694 351 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 S100A5P33763 92 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 SOX5P35711 763 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 YWHAGP61981 247 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP3-203ENST00000538686 CTAG1AP78358 180 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 PTK2BQ14289 1009 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 OXA1LQ15070 435 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 FXNQ16595 210 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 AGAP7PQ5VUJ5 663 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 OGFOD2Q6N063 350 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 HEATR4Q86WZ0 1026 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 FBXO27Q8NI29 283 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 KRT35Q92764 455 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 C9orf72Q96LT7 481 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 MROQ9BYG7 248 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 KLHL25Q9H0H3 589 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 TNRQ92752 1358 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ROBO2Q9HCK4 1378 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 LAMB1P07942 1786 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 I3L4J1 428 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 M0R2N6 131 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 CYP26A1O43174 497 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 TRPA1O75762 1119 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 MTA2O94776 668 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 KPNA1P52294 538 aaPredicted RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 TFAP4Q01664 338 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 TUBA3CQ13748 450 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 SF3B4Q15427 424 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 21.4
USP3-203ENST00000538686 FAM26FQ5R3K3 315 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ALYREFQ86V81 257 aaKnown RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 TICAM1Q8IUC6 712 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 SIX5Q8N196 739 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 GALNT4Q8N4A0 578 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ANGPTL6Q8NI99 470 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 NLRP7Q8WX94 980 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ATL1Q8WXF7 558 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 C12orf43Q96C57 262 aaKnown RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 DOK1Q99704 481 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 CAAP1Q9H8G2 361 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 BLOC1S4Q9NUP1 217 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ARMC1Q9NVT9 282 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 ATP11BQ9Y2G3 1177 aa12.95□□□□□ -0.34
USP3-203ENST00000538686 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
USP3-203ENST00000538686 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 SYCE1LA8MT33 242 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ATP5J2-PTCD1G3V325 749 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 M0QX08 132 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms