RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 SF3B1O75533 1304 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPARC-207ENST00000537849 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 BEST1O76090 585 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 LAG3P18627 525 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 RGS7P49802 495 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 CDR1P51861 262 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 BCAT1P54687 386 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 NAP1L1P55209 391 aaKnown RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 TSPY1Q01534 308 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 CYP4A22Q5TCH4 519 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 RSPO2Q6UXX9 243 aaPredicted RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPARC-207ENST00000537849 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
SPARC-207ENST00000537849 HSFY1Q96LI6 401 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 SMOQ99835 787 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 TTPALQ9BTX7 342 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 CSNK1G1Q9HCP0 422 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 TMEM30AQ9NV96 361 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 PARVAQ9NVD7 372 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 SPG21Q9NZD8 308 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
SPARC-207ENST00000537849 CARNS1A5YM72 827 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 SIGLEC16A6NMB1 481 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 HHLA1C9JL84 531 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 H7C4K7 107 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 XPO1O14980 1071 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 GJB6O95452 261 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 NPR3P17342 541 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 MAPRE1Q15691 268 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 DNTTIP2Q5QJE6 756 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 MEI1Q5TIA1 1274 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 CLEC20AQ6ZU45 233 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 FAM35AQ86V20 835 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
SPARC-207ENST00000537849 KCTD13Q8WZ19 329 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 MYLPFQ96A32 169 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 TLR10Q9BXR5 811 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 TRIM7Q9C029 511 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 WDR35Q9P2L0 1181 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 ALG6Q9Y672 507 aa12.37□□□□□ -0.43
SPARC-207ENST00000537849 CTAGE9A4FU28 777 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 E5RJQ4 531 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 PIK3R2O00459 728 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 AP1G2O75843 785 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 VNN2O95498 520 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 SOD2P04179 222 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 ATP1A1P05023 1023 aaKnown RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 BDNFP23560 247 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 RABGGTBP53611 331 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 MAP3K7CLP57077 242 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 RPL7AP62424 266 aaKnown RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 PRSS55Q6UWB4 352 aaPredicted RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 PIGZQ86VD9 579 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 SCUBE3Q8IX30 993 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 MSANTD4Q8NCY6 345 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 PIK3R5Q8WYR1 880 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 KCNK16Q96T55 309 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 MIS12Q9H081 205 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 GOLPH3Q9H4A6 298 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
SPARC-207ENST00000537849 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
SPARC-207ENST00000537849 STRIP2Q9ULQ0 834 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms