RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 GLRA4Q5JXX5 417 aa7□□□□□ -1.29
IFT88-207ENST00000537103 KIAA1841Q6NSI8 718 aa7□□□□□ -1.29
IFT88-207ENST00000537103 TRIM65Q6PJ69 517 aa7□□□□□ -1.29
IFT88-207ENST00000537103 ITIH5Q86UX2 942 aa7□□□□□ -1.29
IFT88-207ENST00000537103 MYCBPAPQ8TBZ2 947 aa7□□□□□ -1.29
IFT88-207ENST00000537103 SHC3Q92529 594 aa7□□□□□ -1.29
IFT88-207ENST00000537103 HNRNPABQ99729 332 aaKnown RBP7□□□□□ -1.29
IFT88-207ENST00000537103 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
IFT88-207ENST00000537103 GPR62Q9BZJ7 368 aa7□□□□□ -1.29
IFT88-207ENST00000537103 ZNF518BQ9C0D4 1074 aa7□□□□□ -1.29
IFT88-207ENST00000537103 SAP130Q9H0E3 1048 aa7□□□□□ -1.29
IFT88-207ENST00000537103 CSNK1G1Q9HCP0 422 aa7□□□□□ -1.29
IFT88-207ENST00000537103 SIX2Q9NPC8 291 aa7□□□□□ -1.29
IFT88-207ENST00000537103 IL37Q9NZH6 218 aa7□□□□□ -1.29
IFT88-207ENST00000537103 PCDHB5Q9Y5E4 795 aa7□□□□□ -1.29
IFT88-207ENST00000537103 BZW2Q9Y6E2 419 aaKnown RBP7□□□□□ -1.29
IFT88-207ENST00000537103 DENND4AQ7Z401 1863 aa7□□□□□ -1.29
IFT88-207ENST00000537103 HAX1O00165 279 aa7□□□□□ -1.29
IFT88-207ENST00000537103 FZD6O60353 706 aa7□□□□□ -1.29
IFT88-207ENST00000537103 ARHGEF15O94989 841 aa7□□□□□ -1.29
IFT88-207ENST00000537103 GLUD1P00367 558 aa7□□□□□ -1.29
IFT88-207ENST00000537103 CST3P01034 146 aaPredicted RBP7□□□□□ -1.29
IFT88-207ENST00000537103 HAPLN1P10915 354 aaPredicted RBP7□□□□□ -1.29
IFT88-207ENST00000537103 ACO1P21399 889 aaKnown RBP7□□□□□ -1.29
IFT88-207ENST00000537103 PON1P27169 355 aa7□□□□□ -1.29
IFT88-207ENST00000537103 MTHFRP42898 656 aa7□□□□□ -1.29
IFT88-207ENST00000537103 MASP1P48740 699 aa7□□□□□ -1.29
IFT88-207ENST00000537103 GSCP56915 257 aaPredicted RBP7□□□□□ -1.29
IFT88-207ENST00000537103 JAM2P57087 298 aa7□□□□□ -1.29
IFT88-207ENST00000537103 CDK17Q00537 523 aa7□□□□□ -1.29
IFT88-207ENST00000537103 AAK1Q2M2I8 961 aa7□□□□□ -1.29
IFT88-207ENST00000537103 LEXMQ3ZCV2 418 aa7□□□□□ -1.29
IFT88-207ENST00000537103 CTXN3Q4LDR2 81 aa7□□□□□ -1.29
IFT88-207ENST00000537103 KLHDC7AQ5VTJ3 777 aa7□□□□□ -1.29
IFT88-207ENST00000537103 TCERG1LQ5VWI1 586 aa7□□□□□ -1.29
IFT88-207ENST00000537103 ARNTL2Q8WYA1 636 aa7□□□□□ -1.29
IFT88-207ENST00000537103 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
IFT88-207ENST00000537103 ARPC5LQ9BPX5 153 aa7□□□□□ -1.29
IFT88-207ENST00000537103 RTP3Q9BQQ7 232 aa7□□□□□ -1.29
IFT88-207ENST00000537103 GPR88Q9GZN0 384 aa7□□□□□ -1.29
IFT88-207ENST00000537103 GANQ9H2C0 597 aa7□□□□□ -1.29
IFT88-207ENST00000537103 LHX5Q9H2C1 402 aa7□□□□□ -1.29
IFT88-207ENST00000537103 SAMSN1Q9NSI8 373 aaKnown RBP7□□□□□ -1.29
IFT88-207ENST00000537103 GCNT4Q9P109 453 aa7□□□□□ -1.29
IFT88-207ENST00000537103 UXTQ9UBK9 157 aaPredicted RBP7□□□□□ -1.29
IFT88-207ENST00000537103 PRKAG3Q9UGI9 489 aa7□□□□□ -1.29
IFT88-207ENST00000537103 LCMT1Q9UIC8 334 aa7□□□□□ -1.29
IFT88-207ENST00000537103 PRG3Q9Y2Y8 225 aaPredicted RBP7□□□□□ -1.29
IFT88-207ENST00000537103 LSM8O95777 96 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 TRIM49P0CI25 452 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 TRIM49CP0CI26 452 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 MYOGP15173 224 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 TKTP29401 623 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 HNRNPH3P31942 346 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 CDH5P33151 784 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 GNL1P36915 607 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 SNX30Q5VWJ9 437 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ISM2Q6H9L7 571 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ANKRD54Q6NXT1 300 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 LILRB2Q8N423 598 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 PDZD8Q8NEN9 1154 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 RIN2Q8WYP3 895 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 SEMA4DQ92854 862 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 MYRFLQ96LU7 910 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 DEPDC7Q96QD5 511 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 CDK5RAP1Q96SZ6 601 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 SYT15Q9BQS2 421 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 CLSTN3Q9BQT9 956 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 TTLL2Q9BWV7 592 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 APOBEC3GQ9HC16 384 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 ASNSD1Q9NWL6 643 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 FAM92AA1XBS5 289 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 XYLBO75191 536 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 RTN3O95197 1032 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 KRT19P08727 400 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 FERP16591 822 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 PRKCIP41743 596 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 EIF1AXP47813 144 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 TUBP50607 506 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ERVFC1P60507 584 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 KCNMA1Q12791 1236 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 SMAD4Q13485 552 aaKnown RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 CNGA2Q16280 664 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 TTC39BQ5VTQ0 682 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 ARCQ7LC44 396 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 FAM71AQ8IYT1 594 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ARHGAP18Q8N392 663 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ZNF454Q8N9F8 522 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 NEK11Q8NG66 645 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 IRGQQ8WZA9 623 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 ZDHHC16Q969W1 377 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 NXPE3Q969Y0 559 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 E2F7Q96AV8 911 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 TMEM176AQ96HP8 235 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 RIPOR3Q96MK2 946 aa6.99□□□□□ -1.29
IFT88-207ENST00000537103 CDX2Q99626 313 aaPredicted RBP6.99□□□□□ -1.29
IFT88-207ENST00000537103 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms