RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 CGRRF1Q99675 332 aa12.68□□□□□ -0.38
PTCD2-211ENST00000536805 ZNF184Q99676 751 aaPredicted RBP12.68□□□□□ -0.38
PTCD2-211ENST00000536805 ZNF518BQ9C0D4 1074 aa12.68□□□□□ -0.38
PTCD2-211ENST00000536805 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
PTCD2-211ENST00000536805 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
PTCD2-211ENST00000536805 CNTN3Q9P232 1028 aa12.68□□□□□ -0.38
PTCD2-211ENST00000536805 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
PTCD2-211ENST00000536805 MAP3K13O43283 966 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 SPAG6O75602 509 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 UPP2O95045 317 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 STBD1O95210 358 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 PIGRP01833 764 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 ATP5BP06576 529 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 WNT7BP56706 349 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 OTUD4Q01804 1114 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 GAD2Q05329 585 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 CBLBQ13191 982 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 TAZQ16635 292 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 SH2D5Q6ZV89 423 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 SESTD1Q86VW0 696 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 TRIM42Q8IWZ5 723 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 SLC44A1Q8WWI5 657 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 ZNF606Q8WXB4 792 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 ADAM33Q9BZ11 813 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 XPNPEP1Q9NQW7 623 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 FBXO6Q9NRD1 293 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 KCNK4Q9NYG8 393 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 AGO2Q9UKV8 859 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
PTCD2-211ENST00000536805 MYH9P35579 1960 aaKnown RBP12.67□□□□□ -0.38
PTCD2-211ENST00000536805 GOLGA8RI6L899 631 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TBC1D12O60347 775 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 RPL22P35268 128 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PGM1P36871 562 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 CACNA2D1P54289 1103 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 SOX10P56693 466 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PTK7Q13308 1070 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TXNRD3NBQ6F5E7 133 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 NET1Q7Z628 596 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TMPRSS6Q8IU80 811 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 ACTL9Q8TC94 416 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PRR11Q96HE9 360 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TCP10L2B9ZVM9 353 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 ZNF862O60290 1169 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TMEM63AO94886 807 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 LDHAP00338 332 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 KRT7P08729 469 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 MYL2P10916 166 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 BGNP21810 368 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 CDH5P33151 784 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 SERPINB4P48594 390 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 GDF10P55107 478 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 BIRC2Q13490 618 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 THOC5Q13769 683 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TBCCQ15814 346 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 BBS9Q3SYG4 887 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 RNF220Q5VTB9 566 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 FAM111AQ96PZ2 611 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 POLR3FQ9H1D9 316 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 C12orf65Q9H3J6 166 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 GINM1Q9NU53 330 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
PTCD2-211ENST00000536805 USP21Q9UK80 565 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 AGTPBP1Q9UPW5 1226 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PPME1Q9Y570 386 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 IKBKGQ9Y6K9 419 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 PSME4Q14997 1843 aa12.66□□□□□ -0.38
PTCD2-211ENST00000536805 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.65□□□□□ -0.38
PTCD2-211ENST00000536805 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
PTCD2-211ENST00000536805 CAPN14A8MX76 684 aa12.65□□□□□ -0.38
PTCD2-211ENST00000536805 INHBAP08476 426 aa12.65□□□□□ -0.38
PTCD2-211ENST00000536805 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
PTCD2-211ENST00000536805 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
PTCD2-211ENST00000536805 ZNF200P98182 395 aaPredicted RBP12.65□□□□□ -0.38
PTCD2-211ENST00000536805 SLC25A11Q02978 314 aaKnown RBP12.65□□□□□ -0.38
PTCD2-211ENST00000536805 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms