RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TMEM150AQ86TG1 271 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RNF135Q8IUD6 432 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SCN4BQ8IWT1 228 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZDHHC14Q8IZN3 488 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PPM1KQ8N3J5 372 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SHKBP1Q8TBC3 707 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FGF13Q92913 245 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KCNK16Q96T55 309 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 BPIFA3Q9BQP9 254 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■□□□ 12.2
TNFRSF1A-208ENST00000536194 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SLC38A8A6NNN8 435 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TADA3O75528 432 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ASGR2P07307 311 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ATP1A3P13637 1013 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ADORA2BP29275 332 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GRIK1P39086 918 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZNF165P49910 485 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 USP46P62068 366 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GCNT1Q02742 428 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 VEPH1Q14D04 833 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 IQCB1Q15051 598 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TEAD2Q15562 447 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 EXOC3L4Q17RC7 722 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 STXBP5Q5T5C0 1151 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PPP1R26Q5T8A7 1209 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GBP6Q6ZN66 633 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ITIH5Q86UX2 942 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FAM200AQ8TCP9 573 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SPATA17Q96L03 361 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZSWIM3Q96MP5 696 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SMOQ99835 787 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZSWIM1Q9BR11 485 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MED10Q9BTT4 135 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 VPS16Q9H269 839 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KRT82Q9NSB4 513 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 EPS15L1Q9UBC2 864 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CDH7Q9ULB5 785 aa12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-208ENST00000536194 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TRIM66O15016 1216 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 AP1G2O75843 785 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NOL4O94818 638 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MICAL2O94851 1124 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CALCAP01258 141 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 F11P03951 625 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CSH1P0DML2 217 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CSH2P0DML3 217 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GABRR2P28476 465 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 COPB1P53618 953 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CYP4A22Q5TCH4 519 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TMEM270Q6UE05 265 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PLCD3Q8N3E9 789 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LEMD2Q8NC56 503 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TFAP2BQ92481 460 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ACSF2Q96CM8 615 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CYFIP2Q96F07 1278 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TRMT2BQ96GJ1 504 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SMARCD1Q96GM5 515 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MYRFLQ96LU7 910 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NAT10Q9H0A0 1025 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SMOC2Q9H3U7 446 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CSNK1G1Q9HCP0 422 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 UBE2TQ9NPD8 197 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 APEX2Q9UBZ4 518 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LIMA1Q9UHB6 759 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MUTYHQ9UIF7 546 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MUC3AQ02505 3323 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NCANO14594 1321 aa12.01□□□□□ -0.49
TNFRSF1A-208ENST00000536194 A0A0C4DFX4 3053 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KIF26AQ9ULI4 1882 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 BECN2A8MW95 431 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 HHLA1C9JL84 531 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ANHXE9PGG2 379 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TNFRSF10AO00220 468 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZNF197O14709 1029 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TNFRSF10BO14763 440 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FCARP24071 287 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KLK7P49862 253 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZNF132P52740 706 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms