RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TRIM65Q6PJ69 517 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 PDZD4Q76G19 769 aaPredicted RBP19.01■□□□□ 0.63
DDX55-204ENST00000536079 OTOP3Q7RTS5 596 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 APTXQ7Z2E3 356 aaKnown RBP19.01■□□□□ 0.63
DDX55-204ENST00000536079 TMEM150AQ86TG1 271 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 ZDHHC14Q8IZN3 488 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 ZMIZ2Q8NF64 920 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 RSAD2Q8WXG1 361 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 MCRS1Q96EZ8 462 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 SMOQ99835 787 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 MED10Q9BTT4 135 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 VPS16Q9H269 839 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 SMOC2Q9H3U7 446 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 ASAH2Q9NR71 780 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 NR2E1Q9Y466 385 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 ASB3Q9Y575 518 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 A0A1W2PRU2 124 aa19■□□□□ 0.63
DDX55-204ENST00000536079 LETM1O95202 739 aaPredicted RBP19■□□□□ 0.63
DDX55-204ENST00000536079 LAMP2P13473 410 aa19■□□□□ 0.63
DDX55-204ENST00000536079 ATP1A3P13637 1013 aa19■□□□□ 0.63
DDX55-204ENST00000536079 RPL10AP62906 217 aaKnown RBP19■□□□□ 0.63
DDX55-204ENST00000536079 CETN1Q12798 172 aa19■□□□□ 0.63
DDX55-204ENST00000536079 IQCB1Q15051 598 aa19■□□□□ 0.63
DDX55-204ENST00000536079 TEAD2Q15562 447 aa19■□□□□ 0.63
DDX55-204ENST00000536079 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
DDX55-204ENST00000536079 PPP1R26Q5T8A7 1209 aaPredicted RBP19■□□□□ 0.63
DDX55-204ENST00000536079 GBP6Q6ZN66 633 aa19■□□□□ 0.63
DDX55-204ENST00000536079 TMEM176AQ96HP8 235 aa19■□□□□ 0.63
DDX55-204ENST00000536079 BPIFA3Q9BQP9 254 aa19■□□□□ 0.63
DDX55-204ENST00000536079 RPP25Q9BUL9 199 aaKnown RBP19■□□□□ 0.63
DDX55-204ENST00000536079 UBE2TQ9NPD8 197 aaPredicted RBP19■□□□□ 0.63
DDX55-204ENST00000536079 EPS15L1Q9UBC2 864 aa19■□□□□ 0.63
DDX55-204ENST00000536079 MUTYHQ9UIF7 546 aa19■□□□□ 0.63
DDX55-204ENST00000536079 CDH7Q9ULB5 785 aa19■□□□□ 0.63
DDX55-204ENST00000536079 MAGED2Q9UNF1 606 aaPredicted RBP19■□□□□ 0.63
DDX55-204ENST00000536079 PTPRDP23468 1912 aa19■□□□□ 0.63
DDX55-204ENST00000536079 GTPBP10A4D1E9 387 aaKnown RBP18.99■□□□□ 0.63
DDX55-204ENST00000536079 TADA3O75528 432 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 NOL4O94818 638 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 GABRR2P28476 465 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 EXOC3L4Q17RC7 722 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 CYP4A22Q5TCH4 519 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 VSTM1Q6UX27 236 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 CYFIP2Q96F07 1278 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 C8orf48Q96LL4 319 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 HEXIM2Q96MH2 286 aaKnown RBP18.99■□□□□ 0.63
DDX55-204ENST00000536079 HNRNPABQ99729 332 aaKnown RBP18.99■□□□□ 0.63
DDX55-204ENST00000536079 ZSWIM1Q9BR11 485 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 KRT82Q9NSB4 513 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.99■□□□□ 0.63
DDX55-204ENST00000536079 LIMA1Q9UHB6 759 aaKnown RBP18.99■□□□□ 0.63
DDX55-204ENST00000536079 DOCK8Q8NF50 2099 aa18.99■□□□□ 0.63
DDX55-204ENST00000536079 TNFRSF10AO00220 468 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 DLL1O00548 723 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 AP1G2O75843 785 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 F11P03951 625 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 TBXAS1P24557 533 aaPredicted RBP18.98■□□□□ 0.63
DDX55-204ENST00000536079 KLK7P49862 253 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 ZNF165P49910 485 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 CYP4F8P98187 520 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 GCNT1Q02742 428 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 VEPH1Q14D04 833 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 TMEM270Q6UE05 265 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 PARM1Q6UWI2 310 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 ITIH5Q86UX2 942 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 GPIHBP1Q8IV16 184 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 TFAP2BQ92481 460 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 ACSF2Q96CM8 615 aaPredicted RBP18.98■□□□□ 0.63
DDX55-204ENST00000536079 SPATA17Q96L03 361 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 PCDHB4Q9Y5E5 795 aa18.98■□□□□ 0.63
DDX55-204ENST00000536079 PES1O00541 588 aaKnown RBP18.97■□□□□ 0.63
DDX55-204ENST00000536079 TNFRSF10BO14763 440 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 CSH1P0DML2 217 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 CSH2P0DML3 217 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 COPB1P53618 953 aaKnown RBP18.97■□□□□ 0.63
DDX55-204ENST00000536079 MAP3K7CLP57077 242 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 CLEC20AQ6ZU45 233 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 GPRIN1Q7Z2K8 1008 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 SCAMP5Q8TAC9 235 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 FGF14Q92915 247 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 SMARCD1Q96GM5 515 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 MYRFLQ96LU7 910 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 ATXN3LQ9H3M9 355 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 CSNK1G1Q9HCP0 422 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 NCANO14594 1321 aa18.97■□□□□ 0.63
DDX55-204ENST00000536079 BECN2A8MW95 431 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 HHLA1C9JL84 531 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 ANHXE9PGG2 379 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 ZNF197O14709 1029 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 TRIM66O15016 1216 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 MICAL2O94851 1124 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 FCARP24071 287 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 ZNF132P52740 706 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 HTR4Q13639 388 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 TAF12Q16514 161 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 PTPN21Q16825 1174 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 FAM78AQ5JUQ0 283 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 LUZP1Q86V48 1076 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 PLCD3Q8N3E9 789 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms