RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 USP37Q86T82 979 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ARID3BQ8IVW6 561 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ATP11CQ8NB49 1132 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 RBM15BQ8NDT2 890 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 USP6NLQ92738 828 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CFAP36Q96G28 342 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 OXNAD1Q96HP4 312 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 TARS2Q9BW92 718 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 RBAKQ9NYW8 714 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-214ENST00000535493 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 KBTBD13C9JR72 458 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 UGT1A9O60656 530 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 EDN1P05305 212 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ALDH18A1P54886 795 aaKnown RBP14.03□□□□□ -0.16
HDAC4-214ENST00000535493 BPIFB4P59827 614 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 RAB6CQ53S08 254 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 IRGCQ6NXR0 463 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ENOSF1Q7L5Y1 443 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 JOSD2Q8TAC2 188 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SH3TC2Q8TF17 1288 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 TMEM174Q8WUU8 243 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 WNK4Q96J92 1243 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 RAB6CQ9H0N0 254 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 POLR3FQ9H1D9 316 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ACSS3Q9H6R3 686 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SYNCQ9H7C4 482 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 UGT1A7Q9HAW7 530 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 UGT1A10Q9HAW8 530 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 UGT1A8Q9HAW9 530 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 WDR35Q9P2L0 1181 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SHOC2Q9UQ13 582 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 TCRBV9S1A1TA0A576 114 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 RAD17O75943 681 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SLC18A1P54219 525 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 LBRQ14739 615 aaKnown RBP14.03□□□□□ -0.16
HDAC4-214ENST00000535493 GPAT2Q6NUI2 795 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 IZUMO2Q6UXV1 221 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ZNF677Q86XU0 584 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-214ENST00000535493 CCDC33Q8N5R6 958 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ARFGAP1Q8N6T3 406 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 NAT8LQ8N9F0 302 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 HIPK4Q8NE63 616 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 HSPH1Q92598 858 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 ANKRD27Q96NW4 1050 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 VCXQ9H320 206 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 PCDH9Q9HC56 1237 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 SNCAIPQ9Y6H5 919 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 IKBKGQ9Y6K9 419 aa14.03□□□□□ -0.16
HDAC4-214ENST00000535493 LRRIQ4A6NIV6 560 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 ICAM1P05362 532 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 RARBP10826 455 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 CHRNA5P30532 468 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 TNFSF9P41273 254 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 MMRN1Q13201 1228 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 PRKD1Q15139 912 aaPredicted RBP14.02□□□□□ -0.16
HDAC4-214ENST00000535493 SGSM1Q2NKQ1 1148 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 WDTC1Q8N5D0 677 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 PPM1NQ8N819 430 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 TFAP2BQ92481 460 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 ZNF668Q96K58 619 aaPredicted RBP14.02□□□□□ -0.16
HDAC4-214ENST00000535493 FGD4Q96M96 766 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 CALN1Q9BXU9 219 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 VPS11Q9H270 941 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 TBC1D22BQ9NU19 505 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 CPSF2Q9P2I0 782 aaKnown RBP14.02□□□□□ -0.16
HDAC4-214ENST00000535493 FBXO40Q9UH90 709 aa14.02□□□□□ -0.16
HDAC4-214ENST00000535493 CXorf49A8MYA2 514 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-214ENST00000535493 MAP3K7O43318 606 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 LMNAP02545 664 aaKnown RBP14.02□□□□□ -0.17
HDAC4-214ENST00000535493 ITGAVP06756 1048 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 PHBP35232 272 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 ETV4P43268 484 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 NCOA4Q13772 614 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 UBAP2LQ14157 1087 aaKnown RBP14.02□□□□□ -0.17
HDAC4-214ENST00000535493 ZBTB33Q86T24 672 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 SLC35B2Q8TB61 432 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 TUBGCP5Q96RT8 1024 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 FOXP3Q9BZS1 431 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 TRIM4Q9C037 500 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 PPM1HQ9ULR3 514 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 DNAH12Q6ZR08 3092 aa14.02□□□□□ -0.17
HDAC4-214ENST00000535493 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 EXTL3O43909 919 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 MMP10P09238 476 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 PSMA2P25787 234 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
HDAC4-214ENST00000535493 TRAF1Q13077 416 aa14.01□□□□□ -0.17
HDAC4-214ENST00000535493 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms