RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 CYFIP2Q96F07 1278 aa25.67■■□□□ 1.7
SIPA1-210ENST00000534406 HNRNPABQ99729 332 aaKnown RBP25.67■■□□□ 1.7
SIPA1-210ENST00000534406 PRKAG3Q9UGI9 489 aa25.67■■□□□ 1.7
SIPA1-210ENST00000534406 F8VP50 259 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 AP1G2O75843 785 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 SERPINC1P01008 464 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 PAEPP09466 180 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 FSHRP23945 695 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 SYCP1Q15431 976 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 ARHGAP44Q17R89 818 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 KLHDC7AQ5VTJ3 777 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 PDZD4Q76G19 769 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-210ENST00000534406 GET4Q7L5D6 327 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-210ENST00000534406 GPR152Q8TDT2 470 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 C8orf48Q96LL4 319 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 CEP295NLQ96MC4 621 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 DMAP1Q9NPF5 467 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-210ENST00000534406 PLCB1Q9NQ66 1216 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 AVENQ9NQS1 362 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-210ENST00000534406 DNAJC12Q9UKB3 198 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 AJAP1Q9UKB5 411 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-210ENST00000534406 SIK3Q9Y2K2 1263 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 FHOD1Q9Y613 1164 aa25.66■■□□□ 1.7
SIPA1-210ENST00000534406 PATJQ8NI35 1801 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 FAM200BP0CF97 657 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CSH1P0DML2 217 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CSH2P0DML3 217 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CD19P15391 556 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 ZNF132P52740 706 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CACNA2D1P54289 1103 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 EPHA5P54756 1037 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 SGO2Q562F6 1265 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 PPP1R26Q5T8A7 1209 aaPredicted RBP25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CYP4A22Q5TCH4 519 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 SMYD5Q6GMV2 418 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 DPY19L2P1Q6NXN4 242 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 DNAJB7Q7Z6W7 309 aaPredicted RBP25.65■■□□□ 1.7
SIPA1-210ENST00000534406 ADHFE1Q8IWW8 467 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 HS6ST3Q8IZP7 471 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 SHC3Q92529 594 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 SPATA17Q96L03 361 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 PCMTD1Q96MG8 357 aaPredicted RBP25.65■■□□□ 1.7
SIPA1-210ENST00000534406 ERGIC2Q96RQ1 377 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 RTN4Q9NQC3 1192 aaKnown RBP25.65■■□□□ 1.7
SIPA1-210ENST00000534406 TMEM30AQ9NV96 361 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 CNTN6Q9UQ52 1028 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 DOCK8Q8NF50 2099 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 GREB1Q4ZG55 1949 aa25.65■■□□□ 1.7
SIPA1-210ENST00000534406 VDRP11473 427 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 UCHL3P15374 230 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 KLK7P49862 253 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 ZP2Q05996 745 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 RAPGEF1Q13905 1077 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 ARHGAP17Q68EM7 881 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 TMC8Q8IU68 726 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 STKLD1Q8NE28 680 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 GANQ9H2C0 597 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 ZNF334Q9HCZ1 680 aaPredicted RBP25.64■■□□□ 1.7
SIPA1-210ENST00000534406 FAM207AQ9NSI2 230 aaPredicted RBP25.64■■□□□ 1.7
SIPA1-210ENST00000534406 KIAA1257Q9ULG3 409 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 USTQ9Y2C2 406 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 MRPS23Q9Y3D9 190 aaKnown RBP25.64■■□□□ 1.7
SIPA1-210ENST00000534406 NR2E1Q9Y466 385 aa25.64■■□□□ 1.7
SIPA1-210ENST00000534406 A0A1B0GTH6 734 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 SLC38A8A6NNN8 435 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 ZNF197O14709 1029 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 NOL4O94818 638 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 FGF19O95750 216 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 MYL4P12829 197 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 SP100P23497 879 aaPredicted RBP25.63■■□□□ 1.69
SIPA1-210ENST00000534406 FANCCQ00597 558 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 SLC5A9Q2M3M2 681 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 PRSS36Q5K4E3 855 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 OTOP3Q7RTS5 596 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 TDRD5Q8NAT2 981 aaKnown RBP25.63■■□□□ 1.69
SIPA1-210ENST00000534406 RNF214Q8ND24 703 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 LRRC3Q9BY71 257 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 DAAM1Q9Y4D1 1078 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 A0A0C4DFX4 3053 aa25.63■■□□□ 1.69
SIPA1-210ENST00000534406 RNF225M0QZC1 329 aaPredicted RBP25.62■■□□□ 1.69
SIPA1-210ENST00000534406 NPR3P17342 541 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 USP8P40818 1118 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 MTMR3Q13615 1198 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 GOLGA7BQ2TAP0 167 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 ADAMTS19Q8TE59 1207 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 ACSF2Q96CM8 615 aaPredicted RBP25.62■■□□□ 1.69
SIPA1-210ENST00000534406 RPGRIP1Q96KN7 1286 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 GCNAQ96QF7 691 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 SMOQ99835 787 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 CSNK1G1Q9HCP0 422 aa25.62■■□□□ 1.69
SIPA1-210ENST00000534406 UXTQ9UBK9 157 aaPredicted RBP25.62■■□□□ 1.69
SIPA1-210ENST00000534406 MAGED2Q9UNF1 606 aaPredicted RBP25.62■■□□□ 1.69
SIPA1-210ENST00000534406 O00370 1275 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 TEX33O43247 280 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 HMGA1P17096 107 aaKnown RBP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 BRD2P25440 801 aaKnown RBP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 GBP2P32456 591 aaPredicted RBP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 MAP3K7CLP57077 242 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 STILQ15468 1287 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 CLEC20AQ6ZU45 233 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms