RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TRIM66O15016 1216 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 CACNA2D1P54289 1103 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 CYP27A1Q02318 531 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 CCDC40Q4G0X9 1142 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 CT47A1Q5JQC4 288 aaPredicted RBP22.72■■□□□ 1.23
PKP3-211ENST00000534401 STXBP5Q5T5C0 1151 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 FUKQ8N0W3 1084 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 CCDC150Q8NCX0 1101 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 ST13P5Q8NFI4 369 aaPredicted RBP22.72■■□□□ 1.23
PKP3-211ENST00000534401 ZSCAN18Q8TBC5 510 aaPredicted RBP22.72■■□□□ 1.23
PKP3-211ENST00000534401 TATDN2Q93075 761 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 TWNKQ96RR1 684 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 KXD1Q9BQD3 176 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 ZNF518BQ9C0D4 1074 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 ATXN3LQ9H3M9 355 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 ZFP14Q9HCL3 533 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 IL37Q9NZH6 218 aa22.72■■□□□ 1.23
PKP3-211ENST00000534401 UXTQ9UBK9 157 aaPredicted RBP22.72■■□□□ 1.23
PKP3-211ENST00000534401 TADA3O75528 432 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 FGFR1OPO95684 399 aaKnown RBP22.71■■□□□ 1.23
PKP3-211ENST00000534401 GPC5P78333 572 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 ACOT1Q86TX2 421 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 SCN4BQ8IWT1 228 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 FBXL6Q8N531 539 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 PBXIP1Q96AQ6 731 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 E2F7Q96AV8 911 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 SLC46A2Q9BY10 475 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 CSNK1G1Q9HCP0 422 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 OBP2AQ9NY56 170 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 NCANO14594 1321 aa22.71■■□□□ 1.23
PKP3-211ENST00000534401 F5P12259 2224 aa22.7■■□□□ 1.23
PKP3-211ENST00000534401 F8VP50 259 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 CLDN5O00501 218 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 DDX6P26196 483 aaKnown RBP eCLIP22.7■■□□□ 1.22
PKP3-211ENST00000534401 ERCC5P28715 1186 aaPredicted RBP22.7■■□□□ 1.22
PKP3-211ENST00000534401 TAF12Q16514 161 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 DPCR1Q3MIW9 517 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 ARHGAP15Q53QZ3 475 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 WDR44Q5JSH3 913 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 FAM35AQ86V20 835 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 UBR7Q8N806 425 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 STKLD1Q8NE28 680 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 RSPRY1Q96DX4 576 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 HNRNPABQ99729 332 aaKnown RBP22.7■■□□□ 1.22
PKP3-211ENST00000534401 NT5C1AQ9BXI3 368 aa22.7■■□□□ 1.22
PKP3-211ENST00000534401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.7■■□□□ 1.222e-6■■■■■ 421.6
PKP3-211ENST00000534401 MYH10P35580 1976 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 KIF26AQ9ULI4 1882 aaPredicted RBP22.69■■□□□ 1.22
PKP3-211ENST00000534401 KRBA1A5PL33 1030 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 TNFRSF10BO14763 440 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 PDGFBP01127 241 aaPredicted RBP22.69■■□□□ 1.22
PKP3-211ENST00000534401 NPR3P17342 541 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 GRIK1P39086 918 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 GPR158Q5T848 1215 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 VITQ6UXI7 678 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 DENND5BQ6ZUT9 1274 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 MON1AQ86VX9 555 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 ARID3BQ8IVW6 561 aaPredicted RBP22.69■■□□□ 1.22
PKP3-211ENST00000534401 MFSD6LQ8IWD5 586 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 DEPDC1BQ8WUY9 529 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 TRPV5Q9NQA5 729 aa22.69■■□□□ 1.22
PKP3-211ENST00000534401 KMT2EQ8IZD2 1858 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 COL4A2P08572 1712 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 ATP8B3O60423 1300 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 CCDC192P0DO97 292 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 VIPR2P41587 438 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 USP46P62068 366 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 CYP4F8P98187 520 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 KCNH2Q12809 1159 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 C12orf29Q8N999 325 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 ZMIZ2Q8NF64 920 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 SMARCD1Q96GM5 515 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 LRRC3BQ96PB8 259 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 ARID3AQ99856 593 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 CISHQ9NSE2 258 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 PATJQ8NI35 1801 aa22.68■■□□□ 1.22
PKP3-211ENST00000534401 FAM92AA1XBS5 289 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 PSMC3P17980 439 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 FCHO2Q0JRZ9 810 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 CUL2Q13617 745 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 CMTM8Q8IZV2 173 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 SLC4A11Q8NBS3 891 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 GCNAQ96QF7 691 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 KCNK16Q96T55 309 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 SMOQ99835 787 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 COMMD8Q9NX08 183 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 EHD2Q9NZN4 543 aa22.67■■□□□ 1.22
PKP3-211ENST00000534401 MAGED2Q9UNF1 606 aaPredicted RBP22.67■■□□□ 1.22
PKP3-211ENST00000534401 MUC6Q6W4X9 2439 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 HEPACAM2A8MVW5 462 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 ARNTLO00327 626 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 MBD3O95983 291 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 AFPP02771 609 aaKnown RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 CFHP08603 1231 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 PFKLP17858 780 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 ANXA13P27216 316 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 RAD23BP54727 409 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 PFKPQ01813 784 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms