RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 C11orf74Q86VG3 221 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 NT5DC4Q86YG4 428 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 C1orf127Q8N9H9 656 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 KDF1Q8NAX2 398 aaPredicted RBP16.04■□□□□ 0.16
CTSB-230ENST00000534149 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 KIF2CQ99661 725 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 TMEM121BQ9BXQ6 578 aaPredicted RBP16.04■□□□□ 0.16
CTSB-230ENST00000534149 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
CTSB-230ENST00000534149 K7EQS6 105 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 HUS1O60921 280 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 CEACAM1P13688 526 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 CSRP1P21291 193 aaKnown RBP16.03■□□□□ 0.16
CTSB-230ENST00000534149 OPRD1P41143 372 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
CTSB-230ENST00000534149 IRX4P78413 519 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 MYL7Q01449 175 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 KCNB1Q14721 858 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 UAP1L1Q3KQV9 507 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 RASSF3Q86WH2 238 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 SPATA2LQ8IUW3 424 aaPredicted RBP16.03■□□□□ 0.16
CTSB-230ENST00000534149 CCDC33Q8N5R6 958 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 MDGA1Q8NFP4 955 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
CTSB-230ENST00000534149 PIGKQ92643 395 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
CTSB-230ENST00000534149 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 ST6GALNAC4Q9H4F1 302 aa16.03■□□□□ 0.16
CTSB-230ENST00000534149 CACNA1EQ15878 2313 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 PKD1L2Q7Z442 2459 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 H3BQV1 296 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 NFATC1O95644 943 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 HOXB3P14651 431 aaPredicted RBP16.02■□□□□ 0.16
CTSB-230ENST00000534149 PI4KAP42356 2102 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 KCNA1Q09470 495 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 COL9A2Q14055 689 aaPredicted RBP16.02■□□□□ 0.16
CTSB-230ENST00000534149 POSTNQ15063 836 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 CFAP221Q4G0U5 840 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
CTSB-230ENST00000534149 FSIP1Q8NA03 581 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 DEFB124Q8NES8 71 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 CCDC26Q8TAB7 109 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 SCNM1Q9BWG6 230 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 MMP17Q9ULZ9 603 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 ARHGAP26Q9UNA1 814 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 SNX9Q9Y5X1 595 aa16.02■□□□□ 0.16
CTSB-230ENST00000534149 MYOFQ9NZM1 2061 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 TNRC6BQ9UPQ9 1833 aaKnown RBP16.01■□□□□ 0.15
CTSB-230ENST00000534149 PPP1R37O75864 691 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 KRT19P08727 400 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTSB-230ENST00000534149 TCF3P15923 654 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 HDCP19113 662 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 ZXDBP98169 803 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 CRY1Q16526 586 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 GAB4Q2WGN9 574 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 KIAA1211LQ6NV74 962 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 DYMQ7RTS9 669 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 SFTPA1Q8IWL2 248 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 ADGRF2Q8IZF7 708 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 CSGALNACT2Q8N6G5 542 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 CXorf38Q8TB03 319 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 RLN3Q8WXF3 142 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 GATA6Q92908 595 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
CTSB-230ENST00000534149 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
CTSB-230ENST00000534149 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
CTSB-230ENST00000534149 PCSK1P29120 753 aa16■□□□□ 0.15
CTSB-230ENST00000534149 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
CTSB-230ENST00000534149 TMEM92Q6UXU6 159 aa16■□□□□ 0.15
CTSB-230ENST00000534149 ARMCX6Q7L4S7 300 aa16■□□□□ 0.15
CTSB-230ENST00000534149 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
CTSB-230ENST00000534149 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
CTSB-230ENST00000534149 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
CTSB-230ENST00000534149 GDAP2Q9NXN4 497 aa16■□□□□ 0.15
CTSB-230ENST00000534149 RBAKQ9NYW8 714 aaPredicted RBP16■□□□□ 0.15
CTSB-230ENST00000534149 TBC1D7Q9P0N9 293 aa16■□□□□ 0.15
CTSB-230ENST00000534149 SIX4Q9UIU6 781 aa16■□□□□ 0.15
CTSB-230ENST00000534149 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
CTSB-230ENST00000534149 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 TMEM8BA6NDV4 472 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 LEFTY2O00292 366 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 GABRDO14764 452 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 SCAMP3O14828 347 aaKnown RBP15.99■□□□□ 0.15
CTSB-230ENST00000534149 ATP2C2O75185 946 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 CYP17A1P05093 508 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 NEFLP07196 543 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 GJB2P29033 226 aa15.99■□□□□ 0.15
CTSB-230ENST00000534149 MAGEA11P43364 429 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms