RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 GIT1Q9Y2X7 761 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 DERAQ9Y315 318 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TTC3P53804 2025 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 MICAL3Q7RTP6 2002 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TDRD15B5MCY1 1934 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 A0A1W2PP55 124 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 MEIS3P2A8K0S8 358 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 PTGESO14684 152 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 EPHB6O15197 1021 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 INPPL1O15357 1258 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 EOMESO95936 686 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CST3P01034 146 aaPredicted RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 HLA-DRAP01903 254 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 GYPCP04921 128 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 NFICP08651 508 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 ACTN1P12814 892 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 ITGA4P13612 1032 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 TNNI1P19237 187 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 AKAP5P24588 427 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 RFC2P35250 354 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 FAM193AP78312 1265 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 APBA1Q02410 837 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 GABPB1Q06547 395 aaPredicted RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 KLHDC7AQ5VTJ3 777 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 JADE1Q6IE81 842 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 MFSD5Q6N075 450 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 SLC24A5Q71RS6 500 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 TRAPPC11Q7Z392 1133 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CCNJLQ8IV13 435 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 DRC7Q8IY82 874 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 HACE1Q8IYU2 909 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 ARMC10Q8N2F6 343 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 GSTCDQ8NEC7 633 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 FBXL13Q8NEE6 735 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 NEK11Q8NG66 645 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 TAS1R2Q8TE23 839 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CACTINQ8WUQ7 758 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 SEPT8Q92599 483 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 PGBD4Q96DM1 585 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 IQCDQ96DY2 449 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 APOL6Q9BWW8 343 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 LSM14BQ9BX40 385 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 NAA15Q9BXJ9 866 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 INTS2Q9H0H0 1204 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 ELAC1Q9H777 363 aaKnown RBP6.59□□□□□ -1.35
CMTM1-220ENST00000534143 MMRN2Q9H8L6 949 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 C1orf112Q9NSG2 853 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 RNF19AQ9NV58 838 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 RAB20Q9NX57 234 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 MIOSQ9NXC5 875 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 GCNT4Q9P109 453 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 FBXL5Q9UKA1 691 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 CAPN11Q9UMQ6 739 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 C2CD2Q9Y426 696 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 LTBP2Q14767 1821 aa6.59□□□□□ -1.35
CMTM1-220ENST00000534143 EYSQ5T1H1 3165 aa6.59□□□□□ -1.36
CMTM1-220ENST00000534143 CDH23Q9H251 3354 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 SMIM28A0A1B0GU29 152 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 A0A1W2PQJ5 194 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ANO9A1A5B4 782 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 MEGF11A6BM72 1044 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 METTL12A8MUP2 240 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ZC3H11AO75152 810 aaKnown RBP eCLIP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TNNC2P02585 160 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM191BP0C7N4 346 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 UCHL3P15374 230 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 RAG1P15918 1043 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CYP3A5P20815 502 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CASP14P31944 242 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 GSDMDP57764 484 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TFAMQ00059 246 aaKnown RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CETN1Q12798 172 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ORC1Q13415 861 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TRIM14Q14142 442 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM132DQ14C87 1099 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 NAB2Q15742 525 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 KIAA0319Q5VV43 1072 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CNKSR3Q6P9H4 555 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ARHGEF19Q8IW93 802 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TC2NQ8N9U0 490 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 LPPQ93052 612 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 ANKRD36BP1Q96IX9 119 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 PPP1R10Q96QC0 940 aaKnown RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 TCF12Q99081 682 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 GAD1Q99259 594 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 RBCK1Q9BYM8 510 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 MTMR12Q9C0I1 747 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 LIN7BQ9HAP6 207 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms