RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 UNC45BQ8IWX7 931 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 WDTC1Q8N5D0 677 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 CPT1BQ92523 772 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 HSPH1Q92598 858 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 CGRRF1Q99675 332 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 CALN1Q9BXU9 219 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 TSPYL2Q9H2G4 693 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-226ENST00000533820 KIAA1217Q5T5P2 1943 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 ITGBL1O95965 494 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 CLDN10P78369 228 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 CXCL9Q07325 125 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 XKR3Q5GH77 459 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 EEPD1Q7L9B9 569 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 ZC3H18Q86VM9 953 aaKnown RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 TMEM35BQ8NCS4 154 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 SLC7A3Q8WY07 619 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 TTC17Q96AE7 1141 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 WDR83Q9BRX9 315 aaKnown RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 MMADHCQ9H3L0 296 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 DENND2DQ9H6A0 471 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 FBXO6Q9NRD1 293 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 TBXAS1P24557 533 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-226ENST00000533820 TEKT4Q8WW24 435 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 RNPEPL1Q9HAU8 725 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 PGAP2Q9UHJ9 254 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 CNTNAP2Q9UHC6 1331 aa20.26■□□□□ 0.83
CAPN1-226ENST00000533820 TMEM63AO94886 807 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 KRT19P08727 400 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 MARK3P27448 753 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 RPL22P35268 128 aaKnown RBP20.25■□□□□ 0.83
CAPN1-226ENST00000533820 PCK1P35558 622 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 POLE2P56282 527 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 ZBTB16Q05516 673 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 CCDC15Q0P6D6 951 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 FYB2Q5VWT5 728 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 DENND1BQ6P3S1 775 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 SYNCQ9H7C4 482 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 A0A0B4J269 797 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 MAGEB2O15479 319 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 AVILO75366 819 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 STAM2O75886 525 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 SKIV2L2P42285 1042 aaKnown RBP20.25■□□□□ 0.83
CAPN1-226ENST00000533820 APBB1IPQ7Z5R6 666 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-226ENST00000533820 THNSL1Q8IYQ7 743 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 KIAA0319LQ8IZA0 1049 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 AGGF1Q8N302 714 aaeCLIP20.25■□□□□ 0.83
CAPN1-226ENST00000533820 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 PCDH9Q9HC56 1237 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 ZNF302Q9NR11 478 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 CALB1P05937 261 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 CDH8P55286 799 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 IGDCC3Q8IVU1 814 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 NAF1Q96HR8 494 aaKnown RBP20.25■□□□□ 0.83
CAPN1-226ENST00000533820 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 HEY2Q9UBP5 337 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 POLIQ9UNA4 740 aa20.25■□□□□ 0.83
CAPN1-226ENST00000533820 COL4A5P29400 1685 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 ZNF646O15015 1829 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-226ENST00000533820 SUPT20HL2P0C7V6 817 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 ARL4CP56559 192 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 MCCD1P59942 119 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-226ENST00000533820 TRPC3Q13507 836 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 SUPT20HL1Q3ZLR7 823 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 NBPF12Q5TAG4 269 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-226ENST00000533820 NPNTQ6UXI9 565 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 RFX6Q8HWS3 928 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 ARL10Q8N8L6 244 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 FOXP3Q9BZS1 431 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 METTL5Q9NRN9 209 aaKnown RBP20.24■□□□□ 0.83
CAPN1-226ENST00000533820 XPO7Q9UIA9 1087 aaKnown RBP20.24■□□□□ 0.83
CAPN1-226ENST00000533820 SHOC2Q9UQ13 582 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 ATP6V1G1O75348 118 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 CALB2P22676 271 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 TUBP50607 506 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 CNTN2Q02246 1040 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 DBN1Q16643 649 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 CEP128Q6ZU80 1094 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 SAMD7Q7Z3H4 446 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 CLNKQ7Z7G1 428 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 TDRPQ86YL5 185 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 NIM1KQ8IY84 436 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 ARFGAP1Q8N6T3 406 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 TTLL6Q8N841 843 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 FAM111AQ96PZ2 611 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 PORCNQ9H237 461 aa20.24■□□□□ 0.83
CAPN1-226ENST00000533820 A6NHS1 94 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 DKC1O60832 514 aaKnown RBP eCLIP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 FAM155BO75949 473 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 KRT3P12035 628 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 CPA2P48052 419 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 PRKG1Q13976 671 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 ATP11CQ8NB49 1132 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 STK32AQ8WU08 396 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 ARL8BQ9NVJ2 186 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 KANSL3Q9P2N6 904 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 ITGAVP06756 1048 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms