RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 POLNQ7Z5Q5 900 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 TRIM50Q86XT4 487 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 RELL1Q8IUW5 271 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 CCDC105Q8IYK2 499 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 UBLCP1Q8WVY7 318 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 C18orf8Q96DM3 657 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 PGM2Q96G03 612 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 BTBD6Q96KE9 485 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 C11orf70Q9BRQ4 267 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 INO80BQ9C086 356 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 DCLK3Q9C098 648 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 MIS12Q9H081 205 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 STMN4Q9H169 189 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 DPH5Q9H2P9 285 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.778e-7■■■■■ 54.2
CHKA-207ENST00000533728 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 DERAQ9Y315 318 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ERICH4A6NGS2 130 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 KRT14P02533 472 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 SCN1AP35498 2009 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 RPL21P46778 160 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 PMS2P54278 862 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 HNRNPH2P55795 449 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 TFAMQ00059 246 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 ADCY2Q08462 1091 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 CALCOCO2Q13137 446 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 BYSLQ13895 437 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 ZNF268Q14587 947 aaPredicted RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 TRIP12Q14669 1992 aaPredicted RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 DCAF4L1Q3SXM0 396 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 DNAJC24Q6P3W2 148 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 RHBDF2Q6PJF5 856 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 MTHFD1LQ6UB35 978 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 MMS22LQ6ZRQ5 1243 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 ERICH1Q86X53 443 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 NPLOC4Q8TAT6 608 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 COPS5Q92905 334 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 SNF8Q96H20 258 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 NLRP4Q96MN2 994 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 C16orf70Q9BSU1 422 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 FAM107BQ9H098 131 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 ABHD16BQ9H3Z7 469 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 RNPEPQ9H4A4 650 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 CNOT10Q9H9A5 744 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 PLEKHA5Q9HAU0 1116 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 ITGA11Q9UKX5 1188 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 DRG1Q9Y295 367 aaKnown RBP10.2□□□□□ -0.78
CHKA-207ENST00000533728 SNX24Q9Y343 169 aa10.2□□□□□ -0.78
CHKA-207ENST00000533728 GRIN2DO15399 1336 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 ATXN2Q99700 1313 aaKnown RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 STAG3L1P0CL83 205 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 HARSP12081 509 aaKnown RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 IRS1P35568 1242 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 FLT3P36888 993 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 MDH1P40925 334 aaKnown RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 NBL1P41271 181 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 GRM5P41594 1212 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 GABRB2P47870 512 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 CLCN3P51790 818 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 PLTPP55058 493 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 INCA1Q0VD86 236 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 PPP1R7Q15435 360 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 LEXMQ3ZCV2 418 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 TMEM240Q5SV17 173 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 C6orf118Q5T5N4 469 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 DENND2CQ68D51 928 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 PTCRAQ6ISU1 281 aaPredicted RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 AADACL2Q6P093 401 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 THNSL1Q8IYQ7 743 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 CCDC89Q8N998 374 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 CXorf38Q8TB03 319 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 FBXO25Q8TCJ0 367 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 NKD2Q969F2 451 aaPredicted RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 CENPTQ96BT3 561 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 TLCD1Q96CP7 247 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 MAML3Q96JK9 1138 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 ADPGKQ9BRR6 497 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 OSBPL8Q9BZF1 889 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 EPB41L4BQ9H329 900 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 PDZD7Q9H5P4 517 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 UBE2ZQ9H832 354 aaPredicted RBP10.19□□□□□ -0.78
CHKA-207ENST00000533728 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 SIX4Q9UIU6 781 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 GGA2Q9UJY4 613 aa10.19□□□□□ -0.78
CHKA-207ENST00000533728 NEU2Q9Y3R4 380 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms