RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 EPCAMP16422 314 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 FECHP22830 423 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 EIF4A3P38919 411 aaKnown RBP12.62□□□□□ -0.39
COMMD9-208ENST00000533643 MAGEA11P43364 429 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 NRIP1P48552 1158 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 GSDMDP57764 484 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 CDK17Q00537 523 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 Q7L0L9 218 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 PCDHB18PQ96TA0 734 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 CHP1Q99653 195 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 SMOQ99835 787 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 LHX5Q9H2C1 402 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
COMMD9-208ENST00000533643 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 HESX1Q9UBX0 185 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 M0QYV0 167 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 SOAT2O75908 522 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 BEST1O76090 585 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 NPR3P17342 541 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 ELF1P32519 619 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.39
COMMD9-208ENST00000533643 BCAT1P54687 386 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 PDE4CQ08493 712 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 HYAL1Q12794 435 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 KCNC3Q14003 757 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 TDRD12Q587J7 1177 aaKnown RBP12.61□□□□□ -0.39
COMMD9-208ENST00000533643 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 CLEC20AQ6ZU45 233 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 WDTC1Q8N5D0 677 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 ZMIZ2Q8NF64 920 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 VN1R2Q8NFZ6 395 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
COMMD9-208ENST00000533643 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
COMMD9-208ENST00000533643 PDCL3Q9H2J4 239 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 CSNK1G1Q9HCP0 422 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
COMMD9-208ENST00000533643 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 F8VP50 259 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 TULP2O00295 520 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 PRRG1O14668 218 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 LSM8O95777 96 aaKnown RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 IGFBP4P22692 258 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 GRIK1P39086 918 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 GPD2P43304 727 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 GPR15P49685 360 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 MAP3K7CLP57077 242 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 RBM10P98175 930 aaKnown RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 BST2Q10589 180 aaKnown RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 DDR2Q16832 855 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 CLEC16AQ2KHT3 1053 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 MGAT5BQ3V5L5 792 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 LLGL2Q6P1M3 1020 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 TRIM72Q6ZMU5 477 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 TMEM139Q8IV31 216 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 HDAC7Q8WUI4 952 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SLC35F5Q8WV83 523 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 PPP2R3CQ969Q6 453 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 C8orf48Q96LL4 319 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 IGFLR1Q9H665 355 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 DMAP1Q9NPF5 467 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-208ENST00000533643 MAN1C1Q9NR34 630 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 CYTH4Q9UIA0 394 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 HCFC2Q9Y5Z7 792 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
COMMD9-208ENST00000533643 A0A087X0T9 212 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 SSU72P8A0A1W2PR75 194 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 HHLA1C9JL84 531 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 GABBR2O75899 941 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 CYP1A1P04798 512 aaPredicted RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 FAM228BP0C875 321 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 SLC8A3P57103 927 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 NOMO3P69849 1222 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 NAA35Q5VZE5 725 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms