RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 KIAA0391O15091 583 aaKnown RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 TGFB1I1O43294 461 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 CALUO43852 315 aaPredicted RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 RHOBTB3O94955 611 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 CLSTN1O94985 981 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 IL18RAPO95256 599 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 CYP11A1P05108 521 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ODC1P11926 461 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 HOXC13P31276 330 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 TUFMP49411 452 aaKnown RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 KCNB1Q14721 858 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 CAMK4Q16566 473 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 BMT2Q1RMZ1 405 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ITPRIPL2Q3MIP1 535 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 CRELD2Q6UXH1 353 aaPredicted RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 CBWD2Q8IUF1 395 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 SMYD4Q8IYR2 804 aaPredicted RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 XXYLT1Q8NBI6 393 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 OR10T2Q8NGX3 314 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 LOXL4Q96JB6 756 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 SEPT5Q99719 369 aaPredicted RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ASB7Q9H672 318 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 THG1LQ9NWX6 298 aaKnown RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 PCDHA5Q9Y5H7 936 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ZZEF1O43149 2961 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ANAPC1Q9H1A4 1944 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 MYO16Q9Y6X6 1858 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 THADAQ6YHU6 1953 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CCDC163A0A0D9SF12 145 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 BIN1O00499 593 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 PIRO00625 290 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 AXIN1O15169 862 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 RPP40O75818 363 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 KRT19P08727 400 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 TMEM191BP0C7N4 346 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 ZNF806P0C7X5 589 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 DLATP10515 647 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 ATF6P18850 670 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 TNNI1P19237 187 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CDC25CP30307 473 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 LIMK1P53667 647 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 SNRPFP62306 86 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 CYP4F8P98187 520 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 VEPH1Q14D04 833 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 SNRNP35Q16560 246 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 MGAT5BQ3V5L5 792 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 AASDHQ4L235 1098 aaPredicted RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 SLC39A12Q504Y0 691 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 TMEM196Q5HYL7 178 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 C9orf57Q5W0N0 161 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 LMBRD2Q68DH5 695 aaPredicted RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 IL31Q6EBC2 164 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CMTM8Q8IZV2 173 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 GAB3Q8WWW8 586 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 GSDMAQ96QA5 445 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 GCNAQ96QF7 691 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 FAM83CQ9BQN1 747 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 SLC46A2Q9BY10 475 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 ZCWPW1Q9H0M4 648 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 KIAA1586Q9HCI6 787 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 PDE11AQ9HCR9 933 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 GKN1Q9NS71 199 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 DPP3Q9NY33 737 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
COPB1-210ENST00000533533 ZMYM5Q9UJ78 669 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 DSEQ9UL01 958 aa9.34□□□□□ -0.91
COPB1-210ENST00000533533 ANO9A1A5B4 782 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 OTOL1A6NHN0 477 aaPredicted RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 PDXKO00764 312 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 TRDMT1O14717 391 aaKnown RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 TM4SF5O14894 197 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 ATG13O75143 517 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 EPN2O95208 641 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 TNNC2P02585 160 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 NR3C1P04150 777 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 PXNP49023 591 aaPredicted RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 CDR1P51861 262 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 WNT7BP56706 349 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 SMARCB1Q12824 385 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 GRSF1Q12849 480 aaKnown RBP eCLIP9.33□□□□□ -0.92
COPB1-210ENST00000533533 STIM1Q13586 685 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 SF3A2Q15428 464 aaKnown RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 SURF1Q15526 300 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 TAF12Q16514 161 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms