RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ALOX15BO15296 676 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 SNX3O60493 162 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 TSPAN1O60635 241 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ATICP31939 592 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 NDST1P52848 882 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 TMEM132DQ14C87 1099 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 TMED2Q15363 201 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 HADHQ16836 314 aaKnown RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 TAB3Q8N5C8 712 aaPredicted RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 CKAP2Q8WWK9 683 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 NLRP7Q8WX94 980 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 HSPH1Q92598 858 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 FAXDC2Q96IV6 333 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 PEBP4Q96S96 227 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 KDM4CQ9H3R0 1056 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 SBF1O95248 1867 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 RASA4BC9J798 803 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 MAGEB2O15479 319 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 RASA4O43374 803 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 PDIA2Q13087 525 aaKnown RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ITIH4Q14624 930 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 MSS51Q4VC12 460 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 C9orf131Q5VYM1 1079 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 UNC45BQ8IWX7 931 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ANKS4BQ8N8V4 417 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 KCTD6Q8NC69 237 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 CMASQ8NFW8 434 aaPredicted RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 CPT1BQ92523 772 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ADAM33Q9BZ11 813 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ACTR5Q9H9F9 607 aaPredicted RBP16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 CYP3A43Q9HB55 503 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 USP18Q9UMW8 372 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 ANK1P16157 1881 aa16.1■□□□□ 0.17
CACNA1E-208ENST00000533229 A0A1B0GUA9 196 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 POC1B-GALNT4F8VUJ3 575 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 H3BRB1 525 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 HMGCRP04035 888 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 VDRP11473 427 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 CTCFP49711 727 aaPredicted RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 GPX6P59796 221 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 SNAPC2Q13487 334 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 MTM1Q13496 603 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 FNBP1LQ5T0N5 605 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 FAM102AQ5T9C2 384 aaPredicted RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 SMYD5Q6GMV2 418 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 CYP4V2Q6ZWL3 525 aaPredicted RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 ANKMY2Q8IV38 441 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 WDR83Q9BRX9 315 aaKnown RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 KIF9Q9HAQ2 790 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 SHOC2Q9UQ13 582 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 TCRBV7S3A2A0A539 114 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 RASSF9O75901 435 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 PFKMP08237 780 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 EPHX2P34913 555 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 RPL22P35268 128 aaKnown RBP16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 MMRN1Q13201 1228 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 LDLRAD1Q5T700 205 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 TRABD2AQ86V40 505 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 VPS37BQ9H9H4 285 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 TSPAN16Q9UKR8 245 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 ACTL7BQ9Y614 415 aa16.09■□□□□ 0.17
CACNA1E-208ENST00000533229 EVPLQ92817 2033 aa16.08■□□□□ 0.17
CACNA1E-208ENST00000533229 E5RJQ4 531 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 GRAP2O75791 330 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 PIAS1O75925 651 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 WDR4P57081 412 aaKnown RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 CEP128Q6ZU80 1094 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 USP50Q70EL3 339 aaPredicted RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 RFX6Q8HWS3 928 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 NAT8LQ8N9F0 302 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 MRRFQ96E11 262 aaKnown RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 TTC25Q96NG3 672 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 CALN1Q9BXU9 219 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 ABCF3Q9NUQ8 709 aa16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
CACNA1E-208ENST00000533229 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 SPAG7O75391 227 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RNF8O76064 485 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms