RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 F8VP50 259 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 TRIM66O15016 1216 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 CSH1P0DML2 217 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 CSH2P0DML3 217 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 MYL4P12829 197 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 GRIK1P39086 918 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 POTEHQ6S545 545 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 GJD3Q8N144 294 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 TDRD5Q8NAT2 981 aaKnown RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 CYFIP2Q96F07 1278 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 SPATA17Q96L03 361 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 C8orf48Q96LL4 319 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 HEXIM2Q96MH2 286 aaKnown RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 AJAP1Q9UKB5 411 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 MRPS23Q9Y3D9 190 aaKnown RBP12.73□□□□□ -0.37
SSBP3-214ENST00000533209 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 DENND4AQ7Z401 1863 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 LGALS16A8MUM7 142 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 BECN2A8MW95 431 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF197O14709 1029 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 AP1G2O75843 785 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 NOL4O94818 638 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 MICAL2O94851 1124 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CAVIN2O95810 425 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 TPM2P07951 284 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CEBPBP17676 345 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ADORA2BP29275 332 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 SSTR3P32745 418 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF132P52740 706 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 MFAP3P55082 362 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 GAREM2Q75VX8 874 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ZMIZ2Q8NF64 920 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 FGF13Q92913 245 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 MYRFLQ96LU7 910 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CEP295NLQ96MC4 621 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 KCNK16Q96T55 309 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 SMOQ99835 787 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 DNAI2Q9GZS0 605 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CSNK1G1Q9HCP0 422 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 DMAP1Q9NPF5 467 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-214ENST00000533209 KRT82Q9NSB4 513 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 EPS15L1Q9UBC2 864 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 NCOR1O75376 2440 aa12.72□□□□□ -0.37
SSBP3-214ENST00000533209 A0A1W2PRU2 124 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 BEST1O76090 585 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 FGF19O95750 216 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 PAEPP09466 180 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 FAM200BP0CF97 657 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 LAMP2P13473 410 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 GJA1P17302 382 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 ANXA13P27216 316 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 GABRR2P28476 465 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 USP46P62068 366 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 TAF12Q16514 161 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 CLEC20AQ6ZU45 233 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 ENOSF1Q7L5Y1 443 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-214ENST00000533209 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 SHC3Q92529 594 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 TRMT2BQ96GJ1 504 aaKnown RBP12.71□□□□□ -0.37
SSBP3-214ENST00000533209 FAM81BQ96LP2 452 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 LSM14BQ9BX40 385 aaKnown RBP12.71□□□□□ -0.37
SSBP3-214ENST00000533209 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
SSBP3-214ENST00000533209 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-214ENST00000533209 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-214ENST00000533209 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms