RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 OR6B3Q8NGW1 331 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 PLEKHO2Q8TD55 490 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 CHAMP1Q96JM3 812 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 FAM126AQ9BYI3 521 aaPredicted RBP25.04■■□□□ 1.6
SMPD1-209ENST00000533196 LMAN1LQ9HAT1 526 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 R4GN57 208 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 EP300Q09472 2414 aaPredicted RBP25.04■■□□□ 1.6
SMPD1-209ENST00000533196 LRRIQ3A6PVS8 624 aaPredicted RBP25.03■■□□□ 1.6
SMPD1-209ENST00000533196 SPECC1L-ADORA2AF8WAN1 911 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 TRIM66O15016 1216 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 MAPK13O15264 365 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 ANXA13P27216 316 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 CTHP32929 405 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 CSTF1Q05048 431 aaKnown RBP25.03■■□□□ 1.6
SMPD1-209ENST00000533196 DPYDQ12882 1025 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 MTAPQ13126 283 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 BIRC3Q13489 604 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 NFIL3Q16649 462 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 TXNDC8Q6A555 127 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 TMC2Q8TDI7 906 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 USP13Q92995 863 aaPredicted RBP25.03■■□□□ 1.6
SMPD1-209ENST00000533196 PCED1BQ96HM7 432 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 PCDHGA2Q9Y5H1 932 aa25.03■■□□□ 1.6
SMPD1-209ENST00000533196 VPS13AQ96RL7 3174 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 IKBKBO14920 756 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 TADA3O75528 432 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 C4BPAP04003 597 aaKnown RBP25.02■■□□□ 1.6
SMPD1-209ENST00000533196 CHRNB1P11230 501 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 PFKLP17858 780 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 BDNFP23560 247 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 GRIK1P39086 918 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 CASP4P49662 377 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 CYP27A1Q02318 531 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 KCNB1Q14721 858 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 PPP2R5DQ14738 602 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 ITPRIPL2Q3MIP1 535 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 ZNF667Q5HYK9 610 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 DGKKQ5KSL6 1271 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 TDRD10Q5VZ19 366 aaKnown RBP25.02■■□□□ 1.6
SMPD1-209ENST00000533196 DENND5BQ6ZUT9 1274 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 STKLD1Q8NE28 680 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 NELL1Q92832 810 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 ZFYVE19Q96K21 471 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 C8orf48Q96LL4 319 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 FAM83CQ9BQN1 747 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 SMG9Q9H0W8 520 aaKnown RBP25.02■■□□□ 1.6
SMPD1-209ENST00000533196 GTSE1Q9NYZ3 720 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 FRMD4BQ9Y2L6 1034 aa25.02■■□□□ 1.6
SMPD1-209ENST00000533196 KINO60870 393 aaKnown RBP25.01■■□□□ 1.59
SMPD1-209ENST00000533196 PTPN1P18031 435 aaKnown RBP25.01■■□□□ 1.59
SMPD1-209ENST00000533196 PDE6CP51160 858 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 CCR3P51677 355 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 FAM160A1Q05DH4 1040 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 NCOA4Q13772 614 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 ZNF699Q32M78 642 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 MDH1BQ5I0G3 518 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 ADSSL1Q8N142 457 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 ELOVL4Q9GZR5 314 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 ZSCAN32Q9NX65 697 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 NXF1Q9UBU9 619 aaKnown RBP25.01■■□□□ 1.59
SMPD1-209ENST00000533196 OTOGLQ3ZCN5 2332 aa25.01■■□□□ 1.59
SMPD1-209ENST00000533196 TRAV19A0A0A6YYK7 116 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 A8MXQ7 604 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 ZNF202O95125 648 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 USP17L7P0C7H9 530 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 PRR29P0C7W0 189 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 P4HA1P13674 534 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 PPP3CCP48454 512 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 ENPEPQ07075 957 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 CC2D1AQ6P1N0 951 aaPredicted RBP25■■□□□ 1.59
SMPD1-209ENST00000533196 SYNPOQ8N3V7 929 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 GUF1Q8N442 669 aaKnown RBP25■■□□□ 1.59
SMPD1-209ENST00000533196 ZBTB44Q8NCP5 570 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 TAF4BQ92750 862 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 TTLL2Q9BWV7 592 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 GKN1Q9NS71 199 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 CCL26Q9Y258 94 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 NME7Q9Y5B8 376 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 DMDP11532 3685 aa25■■□□□ 1.59
SMPD1-209ENST00000533196 TCF3P15923 654 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 SOX9P48436 509 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 NOP14P78316 857 aaKnown RBP24.99■■□□□ 1.59
SMPD1-209ENST00000533196 AMPD2Q01433 879 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 SGSM1Q2NKQ1 1148 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 ZACNQ401N2 412 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 B3GALNT2Q8NCR0 500 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 ATRIPQ8WXE1 791 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 GOLPH3LQ9H4A5 285 aa24.99■■□□□ 1.59
SMPD1-209ENST00000533196 HELZP42694 1942 aaKnown RBP24.98■■□□□ 1.59
SMPD1-209ENST00000533196 RPL13P26373 211 aaKnown RBP24.98■■□□□ 1.59
SMPD1-209ENST00000533196 NRLP54845 237 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 NUCB2P80303 420 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 RUNX3Q13761 415 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 PDGFRLQ15198 375 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 CEP135Q66GS9 1140 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 SPEM1Q8N4L4 309 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 TNIP3Q96KP6 325 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 TRPM5Q9NZQ8 1165 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 GCNT4Q9P109 453 aa24.98■■□□□ 1.59
SMPD1-209ENST00000533196 ATP8B3O60423 1300 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms