RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 SCYL2Q6P3W7 929 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 MAIP1Q8WWC4 291 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 SNF8Q96H20 258 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 CFAP57Q96MR6 1250 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 VRTNQ9H8Y1 702 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 RSPH14Q9UHP6 348 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 ABT1Q9ULW3 272 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 TJP3O95049 919 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 CDKN2BP42772 138 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 AFF1P51825 1210 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 SLC25A11Q02978 314 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 KYNUQ16719 465 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 KYAT1Q16773 422 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 CCDC38Q502W7 563 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 TFDP3Q5H9I0 405 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 C9orf57Q5W0N0 161 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 BEST2Q8NFU1 509 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 LRRN4Q8WUT4 740 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 CDC42EP4Q9H3Q1 356 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 GABRQQ9UN88 632 aa14.1□□□□□ -0.15
CAPRIN1-212ENST00000532820 hCG_1818297A0A087WSY0 165 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 HMGB1P1B2RPK0 211 aaPredicted RBP14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 CST8O60676 142 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 MAP3K6O95382 1288 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 HMGCRP04035 888 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 PDGFRAP16234 1089 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 SEC24CP53992 1094 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 ADAM17P78536 824 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 PURAQ00577 322 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 KCTD6Q8NC69 237 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 MDM1Q8TC05 714 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 BCAS4Q8TDM0 211 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 CLEC4CQ8WTT0 213 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 USP6NLQ92738 828 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 TMEM51Q9NW97 253 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 LIASO43766 372 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 FGFR1P11362 822 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 IFI35P80217 286 aaPredicted RBP14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 PTK6Q13882 451 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 LONRF1Q17RB8 773 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 SYCP2LQ5T4T6 812 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 CAPN12Q6ZSI9 719 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 GRK7Q8WTQ7 553 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 RXFP2Q8WXD0 754 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 RUNDC3BQ96NL0 473 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 GPATCH2LQ9NWQ4 482 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 GRIN2DO15399 1336 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 GOLGA8MH3BSY2 632 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 SGK1O00141 431 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 RIPK2O43353 540 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 ARSEP51690 589 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 TAP1Q03518 808 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 IPO4Q8TEX9 1081 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 WNT8BQ93098 351 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 C9orf72Q96LT7 481 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 PEBP4Q96S96 227 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 APBA2Q99767 749 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 OSBPL7Q9BZF2 842 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 ZFYVE28Q9HCC9 887 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 PPANQ9NQ55 473 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 IPPQ9Y573 584 aa14.09□□□□□ -0.15
CAPRIN1-212ENST00000532820 RNF8O76064 485 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 RARBP10826 455 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 RABGGTBP53611 331 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.167e-8■■■□□ 14.7
CAPRIN1-212ENST00000532820 LCLAT1Q6UWP7 414 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 NGRNQ9NPE2 291 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 USP18Q9UMW8 372 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 HAS3O00219 553 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ITIH2P19823 946 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 GPS1Q13098 491 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ZBTB6Q15916 424 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 KDM7AQ6ZMT4 941 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 NDRG1Q92597 394 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 LPPQ93052 612 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 C3orf70A6NLC5 250 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 SHOX2O60902 331 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ATP2C2O75185 946 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 RARGP13631 454 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 LCP1P13796 627 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 TFE3P19532 575 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 OTUD4Q01804 1114 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 HADHQ16836 314 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 FBXO47Q5MNV8 452 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 CYP4F22Q6NT55 531 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 RFX6Q8HWS3 928 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 ACTL9Q8TC94 416 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 SLCO2A1Q92959 643 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 PLEKHA5Q9HAU0 1116 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.08□□□□□ -0.168e-6■□□□□ 8.4
CAPRIN1-212ENST00000532820 WHRNQ9P202 907 aa14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 FEZ2Q9UHY8 353 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-212ENST00000532820 EIF3HO15372 352 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms