RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 MYL6P60660 151 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 FASTKD1Q53R41 847 aaKnown RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 PLPPR4Q7Z2D5 763 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 DDX20Q9UHI6 824 aaKnown RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 ADH1AP07327 375 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 ARHGDIAP52565 204 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SESN2P58004 480 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 DUSP28Q4G0W2 176 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 TRMT10CQ7L0Y3 403 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SLC25A41Q8N5S1 370 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 RAB23Q9ULC3 237 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 PHF2O75151 1096 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 HAUS5O94927 633 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 RPSAP08865 295 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SCNN1GP51170 649 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 BST2Q10589 180 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 PCBP1Q15365 356 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 ELOA2Q8IYF1 753 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 MSL3Q8N5Y2 521 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 ATP6V1G3Q96LB4 118 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SF3B1O75533 1304 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 A0A1W2PQJ5 194 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 GMNCA6NCL1 334 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SPTLC1O15269 473 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 DIAPH2O60879 1101 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SPAG7O75391 227 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 PARNO95453 639 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 SERPIND1P05546 499 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 YWHAQP27348 245 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 ARFIP2P53365 341 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 FSTL1Q12841 308 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.53
PTPRK-221ENST00000532331 TAF11Q15544 211 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 USP38Q8NB14 1042 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
PTPRK-221ENST00000532331 FZD9O00144 591 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 TADA3O75528 432 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 CD52P31358 61 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 MLH1P40692 756 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 CASP4P49662 377 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 TKTL1P51854 596 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 GRIN1Q05586 938 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PDCD2Q16342 344 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 GRAMD1BQ3KR37 738 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 KLHDC7AQ5VTJ3 777 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PURBQ96QR8 312 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 MLXIPLQ9NP71 852 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 ADAM21Q9UKJ8 722 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 AOC2O75106 756 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 RECQL4O94761 1208 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SMARCD1Q96GM5 515 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SENP1Q9P0U3 644 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SLIT2O94813 1529 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SETSIPP0DME0 302 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SELPP16109 830 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 CRYBB1P53674 252 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SMAD1Q15797 465 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.76□□□□□ -0.536e-7■■□□□ 14
PTPRK-221ENST00000532331 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 AIPL1Q9NZN9 384 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 LACTBL1A8MY62 500 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PLA2G6O60733 806 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 DDX5P17844 614 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PRKCZQ05513 592 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 MTA1Q13330 715 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 EFTUD2Q15029 972 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 TBCCQ15814 346 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 KCNA10Q16322 511 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 IPMKQ8NFU5 416 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 PPTC7Q8NI37 304 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 WDR24Q96S15 920 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 CYTH2Q99418 400 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 POP1Q99575 1024 aaKnown RBP11.76□□□□□ -0.53
PTPRK-221ENST00000532331 SCOCQ9UIL1 159 aa11.76□□□□□ -0.53
PTPRK-221ENST00000532331 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms