RNA–Protein interactions for RNA: ENST00000532147.1

NFRKB-210, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-210ENST00000532147 KXD1Q9BQD3 176 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
NFRKB-210ENST00000532147 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 ZFP14Q9HCL3 533 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■■■■ 111.8
NFRKB-210ENST00000532147 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
NFRKB-210ENST00000532147 CLDN5O00501 218 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 TADA3O75528 432 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.35
NFRKB-210ENST00000532147 GRIK1P39086 918 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 GPC5P78333 572 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 CYP4F8P98187 520 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
NFRKB-210ENST00000532147 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 STXBP5Q5T5C0 1151 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
NFRKB-210ENST00000532147 FAM35AQ86V20 835 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 DEPDC1BQ8WUY9 529 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 PLA2G2FQ9BZM2 168 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 SLITRK6Q9H5Y7 841 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 PTPRDP23468 1912 aa12.85□□□□□ -0.35
NFRKB-210ENST00000532147 F8VP50 259 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 PDGFBP01127 241 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 CFHP08603 1231 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 ANXA13P27216 316 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 ERCC5P28715 1186 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 PFKPQ01813 784 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 VITQ6UXI7 678 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 ARID3BQ8IVW6 561 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 MFSD6LQ8IWD5 586 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 MRPS31Q92665 395 aaKnown RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 TATDN2Q93075 761 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 OBP2AQ9NY56 170 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 DACH1Q9UI36 760 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 FBXL21Q9UKT6 434 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-210ENST00000532147 NCANO14594 1321 aa12.84□□□□□ -0.35
NFRKB-210ENST00000532147 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.35
NFRKB-210ENST00000532147 KRBA1A5PL33 1030 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 MBD3O95983 291 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 AFPP02771 609 aaKnown RBP12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CCDC130P13994 396 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 PSMC3P17980 439 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CD58P19256 250 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
NFRKB-210ENST00000532147 VIPR2P41587 438 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 USP46P62068 366 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CETN1Q12798 172 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 ORC1Q13415 861 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CUL2Q13617 745 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 SUGP1Q8IWZ8 645 aaKnown RBP12.83□□□□□ -0.36
NFRKB-210ENST00000532147 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 LMO3Q8TAP4 145 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 RSPRY1Q96DX4 576 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 DMAP1Q9NPF5 467 aaPredicted RBP12.83□□□□□ -0.36
NFRKB-210ENST00000532147 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 IL37Q9NZH6 218 aa12.83□□□□□ -0.36
NFRKB-210ENST00000532147 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
NFRKB-210ENST00000532147 TNFRSF10BO14763 440 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 AP1G2O75843 785 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
NFRKB-210ENST00000532147 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 NPR3P17342 541 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 PFKLP17858 780 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 COL9A1P20849 921 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 PPP3CCP48454 512 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 CLCN5P51795 746 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
NFRKB-210ENST00000532147 ZNF268Q14587 947 aaPredicted RBP12.82□□□□□ -0.36
NFRKB-210ENST00000532147 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms