RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 GIPC2Q8TF65 315 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 ATXN2LQ8WWM7 1075 aaKnown RBP23.64■■□□□ 1.37
LRRK1-208ENST00000532029 NAA15Q9BXJ9 866 aaKnown RBP23.64■■□□□ 1.37
LRRK1-208ENST00000532029 STK33Q9BYT3 514 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 RBSNQ9H1K0 784 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 KRT82Q9NSB4 513 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 CEP72Q9P209 647 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 RNF225M0QZC1 329 aaPredicted RBP23.63■■□□□ 1.37
LRRK1-208ENST00000532029 NOL4O94818 638 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 FAM200BP0CF97 657 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 PTPN2P17706 415 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 MRPS5P82675 430 aaKnown RBP23.63■■□□□ 1.37
LRRK1-208ENST00000532029 PLCB2Q00722 1185 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 PPP1R26Q5T8A7 1209 aaPredicted RBP23.63■■□□□ 1.37
LRRK1-208ENST00000532029 SDHAF4Q5VUM1 108 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 ARHGAP17Q68EM7 881 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 GRASPQ7Z6J2 395 aaPredicted RBP23.63■■□□□ 1.37
LRRK1-208ENST00000532029 FEZF2Q8TBJ5 459 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 C8orf48Q96LL4 319 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 CORO1BQ9BR76 489 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 DMAP1Q9NPF5 467 aaPredicted RBP23.63■■□□□ 1.37
LRRK1-208ENST00000532029 CDH22Q9UJ99 828 aa23.63■■□□□ 1.37
LRRK1-208ENST00000532029 F8VP50 259 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 FOXN3O00409 490 aaPredicted RBP23.62■■□□□ 1.37
LRRK1-208ENST00000532029 CBX2Q14781 532 aaPredicted RBP23.62■■□□□ 1.37
LRRK1-208ENST00000532029 PTPN21Q16825 1174 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 GAS2L3Q86XJ1 694 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.62■■□□□ 1.37
LRRK1-208ENST00000532029 GPR152Q8TDT2 470 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 SUSD6Q92537 303 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 SPAG5Q96R06 1193 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 NLRC4Q9NPP4 1024 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 HESX1Q9UBX0 185 aa23.62■■□□□ 1.37
LRRK1-208ENST00000532029 EYSQ5T1H1 3165 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 EPHB6O15197 1021 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 CSH1P0DML2 217 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 CSH2P0DML3 217 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 SLC8A3P57103 927 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 STILQ15468 1287 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 GOLGA7BQ2TAP0 167 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 PABPC1LQ4VXU2 614 aaKnown RBP23.61■■□□□ 1.37
LRRK1-208ENST00000532029 CACNA2D4Q7Z3S7 1137 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 DNAJB7Q7Z6W7 309 aaPredicted RBP23.61■■□□□ 1.37
LRRK1-208ENST00000532029 PSMG2Q969U7 264 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 SPATA17Q96L03 361 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 CEP295NLQ96MC4 621 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 XPO4Q9C0E2 1151 aaKnown RBP23.61■■□□□ 1.37
LRRK1-208ENST00000532029 ASAH2Q9NR71 780 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 HCFC1R1Q9NWW0 138 aa23.61■■□□□ 1.37
LRRK1-208ENST00000532029 DNMT3BQ9UBC3 853 aaKnown RBP23.61■■□□□ 1.37
LRRK1-208ENST00000532029 CLUHO75153 1309 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 CYP26A1O43174 497 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 PNMA6AP0CW24 399 aaPredicted RBP23.6■■□□□ 1.37
LRRK1-208ENST00000532029 BRD2P25440 801 aaKnown RBP23.6■■□□□ 1.37
LRRK1-208ENST00000532029 GNA15P30679 374 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 CACNA2D1P54289 1103 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 MAP3K7CLP57077 242 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 BPIFB4P59827 614 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 PTK2Q05397 1052 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 SMAD2Q15796 467 aaKnown RBP23.6■■□□□ 1.37
LRRK1-208ENST00000532029 CYP4A22Q5TCH4 519 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 FAM71AQ8IYT1 594 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 LEMD2Q8NC56 503 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 DUSP16Q9BY84 665 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 WDR6Q9NNW5 1121 aaKnown RBP23.6■■□□□ 1.37
LRRK1-208ENST00000532029 TSPAN16Q9UKR8 245 aa23.6■■□□□ 1.37
LRRK1-208ENST00000532029 SLC38A8A6NNN8 435 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 F8VZ95 297 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 O00370 1275 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 THAP12O43422 761 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 MED7O43513 233 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 RHOP08100 348 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 NPR3P17342 541 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 STAT1P42224 750 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 KCNQ1P51787 676 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 CNGA2Q16280 664 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 LCLAT1Q6UWP7 414 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 PDZD4Q76G19 769 aaPredicted RBP23.59■■□□□ 1.37
LRRK1-208ENST00000532029 ANKRD52Q8NB46 1076 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 TFAP2BQ92481 460 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 KCNK16Q96T55 309 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 SMOQ99835 787 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 GPR88Q9GZN0 384 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 POMKQ9H5K3 350 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 CSNK1G1Q9HCP0 422 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 EHD2Q9NZN4 543 aa23.59■■□□□ 1.37
LRRK1-208ENST00000532029 MAGED2Q9UNF1 606 aaPredicted RBP23.59■■□□□ 1.37
LRRK1-208ENST00000532029 BRWD1Q9NSI6 2320 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 CALCAP01258 141 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 MYL4P12829 197 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 IL9P15248 144 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 FSHRP23945 695 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 NTHL1P78549 312 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 CLEC20AQ6ZU45 233 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 DENND5BQ6ZUT9 1274 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 HS6ST3Q8IZP7 471 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 STKLD1Q8NE28 680 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 ASB2Q96Q27 587 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 NUP58Q9BVL2 599 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 TMEM30AQ9NV96 361 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms