RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 USP46P62068 366 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 PDGFRLQ15198 375 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 KRT79Q5XKE5 535 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 SCN4BQ8IWT1 228 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 TXNDC5Q8NBS9 432 aaKnown RBP9.66□□□□□ -0.86
USF1-210ENST00000531842 OLIG1Q8TAK6 271 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 SPPL2BQ8TCT7 592 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 HMGB4Q8WW32 186 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 ACDQ96AP0 544 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 CNOT6LQ96LI5 555 aaKnown RBP9.66□□□□□ -0.86
USF1-210ENST00000531842 REEP2Q9BRK0 252 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 OXCT2Q9BYC2 517 aaPredicted RBP9.66□□□□□ -0.86
USF1-210ENST00000531842 DPP3Q9NY33 737 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 GTF3C4Q9UKN8 822 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 MMP17Q9ULZ9 603 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 L1RE1Q9UN81 338 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 PCDHB5Q9Y5E4 795 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 URB1O60287 2271 aaKnown RBP9.66□□□□□ -0.86
USF1-210ENST00000531842 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
USF1-210ENST00000531842 A0A0B4J269 797 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 MAP3K13O43283 966 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 ADAM23O75077 832 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 CYP17A1P05093 508 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 P2RY2P41231 377 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 TAF6P49848 677 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SMTNP53814 917 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 FAM160A1Q05DH4 1040 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SCAPQ12770 1279 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SEMA3BQ13214 749 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 PDIA5Q14554 519 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 CRY1Q16526 586 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 MAP7D1Q3KQU3 841 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 FBXO43Q4G163 708 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 CRELD2Q6UXH1 353 aaPredicted RBP9.65□□□□□ -0.86
USF1-210ENST00000531842 FILIP1Q7Z7B0 1213 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 PDZD3Q86UT5 571 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 METTL23Q86XA0 190 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 PROSER1Q86XN7 944 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 THEM5Q8N1Q8 247 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 PDCL2Q8N4E4 241 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SYT2Q8N9I0 419 aaPredicted RBP9.65□□□□□ -0.86
USF1-210ENST00000531842 IL17RCQ8NAC3 791 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 MDM1Q8TC05 714 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 HNRNPLLQ8WVV9 542 aaKnown RBP9.65□□□□□ -0.86
USF1-210ENST00000531842 PKMYT1Q99640 499 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SLC6A17Q9H1V8 727 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 FOXP1Q9H334 677 aaPredicted RBP9.65□□□□□ -0.86
USF1-210ENST00000531842 ZHX3Q9H4I2 956 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 KIF9Q9HAQ2 790 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 SMPD4Q9NXE4 827 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 BCCIPQ9P287 314 aaKnown RBP eCLIP9.65□□□□□ -0.86
USF1-210ENST00000531842 HSFX1Q9UBD0 423 aa9.65□□□□□ -0.86
USF1-210ENST00000531842 TENM4Q6N022 2769 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 TRAV19A0A0A6YYK7 116 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 TCRBV21S2A2A0A5A6 115 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 KPNA7A9QM74 516 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 TRIM24O15164 1050 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 XPOTO43592 962 aaKnown RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 NOL4O94818 638 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 PRB1P04280 392 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 CSH1P0DML2 217 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 CSH2P0DML3 217 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 CD59P13987 128 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 PSMC1P62191 440 aaKnown RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 ZNF268Q14587 947 aaPredicted RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 GPBP1Q86WP2 473 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 MIB1Q86YT6 1006 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 SYT12Q8IV01 421 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 PGBD3Q8N328 593 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 MYCT1Q8N699 235 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 FAM184AQ8NB25 1140 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 ATP2A3Q93084 1043 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 FIZ1Q96SL8 496 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 NUSAP1Q9BXS6 441 aaKnown RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 RNF38Q9H0F5 515 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 C17orf75Q9HAS0 396 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 DDX43Q9NXZ2 648 aaKnown RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 EVLQ9UI08 416 aaPredicted RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 PILRBQ9UKJ0 227 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 MYH10P35580 1976 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 TP53BP1Q12888 1972 aaPredicted RBP9.64□□□□□ -0.87
USF1-210ENST00000531842 NUMA1Q14980 2115 aa9.64□□□□□ -0.87
USF1-210ENST00000531842 KALRNO60229 2985 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 VWA3AA6NCI4 1184 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 LEFTY2O00292 366 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 SH3BP5O60239 455 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 CD2BP2O95400 341 aaKnown RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 HDCP19113 662 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
USF1-210ENST00000531842 ATP2C1P98194 919 aaPredicted RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 AMPD2Q01433 879 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 GRIN1Q05586 938 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 KCNA1Q09470 495 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms