RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 DDR2Q16832 855 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 INTS6LQ5JSJ4 861 aaKnown RBP20.44■□□□□ 0.86
UBXN1-212ENST00000531625 SDHAF4Q5VUM1 108 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 RNF43Q68DV7 783 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 LRRC52Q8N7C0 313 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 STKLD1Q8NE28 680 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 CCDC26Q8TAB7 109 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 EZH1Q92800 747 aaPredicted RBP20.44■□□□□ 0.86
UBXN1-212ENST00000531625 CD101Q93033 1021 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 IKZF4Q9H2S9 585 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 DUS2Q9NX74 493 aaKnown RBP20.44■□□□□ 0.86
UBXN1-212ENST00000531625 SEL1LQ9UBV2 794 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 ZZEF1O43149 2961 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 IGF2RP11717 2491 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 TRAV19A0A0A6YYK7 116 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 POLR2BP30876 1174 aaKnown RBP20.43■□□□□ 0.86
UBXN1-212ENST00000531625 TFAMQ00059 246 aaKnown RBP20.43■□□□□ 0.86
UBXN1-212ENST00000531625 MYL7Q01449 175 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 EML3Q32P44 896 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 CFAP221Q4G0U5 840 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 SHC4Q6S5L8 630 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 SFR1Q86XK3 245 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 BRSK2Q8IWQ3 736 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 C1orf127Q8N9H9 656 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 CACTINQ8WUQ7 758 aaKnown RBP20.43■□□□□ 0.86
UBXN1-212ENST00000531625 SLC22A12Q96S37 553 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 GDAP2Q9NXN4 497 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 DDX43Q9NXZ2 648 aaKnown RBP20.43■□□□□ 0.86
UBXN1-212ENST00000531625 CCDC39Q9UFE4 941 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 AGAP1Q9UPQ3 857 aa20.43■□□□□ 0.86
UBXN1-212ENST00000531625 BCLAF3A2AJT9 711 aaKnown RBP20.42■□□□□ 0.86
UBXN1-212ENST00000531625 ITGB3P05106 788 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 TCF3P15923 654 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 IFNAR2P48551 515 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 WNT7BP56706 349 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 NR1H3Q13133 447 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 TCEAL6Q6IPX3 200 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 C11orf74Q86VG3 221 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 CXorf38Q8TB03 319 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 TCEAL3Q969E4 200 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 FUBP3Q96I24 572 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBXN1-212ENST00000531625 CYP2S1Q96SQ9 504 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 FAM213AQ9BRX8 229 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 TRPC7Q9HCX4 862 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 GCNT4Q9P109 453 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 GTF3C4Q9UKN8 822 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 EXOC7Q9UPT5 735 aa20.42■□□□□ 0.86
UBXN1-212ENST00000531625 ANAPC1Q9H1A4 1944 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 GABRDO14764 452 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 DCLK1O15075 740 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 CAVIN2O95810 425 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 CKMP06732 381 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 LHX1P48742 406 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 CREB5Q02930 508 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 TOP6BLQ8N6T0 577 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 FSIP1Q8NA03 581 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 EDEM2Q9BV94 578 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 PANK2Q9BZ23 570 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 FAM13BQ9NYF5 915 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 ITGA11Q9UKX5 1188 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 WNT6Q9Y6F9 365 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 NUP205Q92621 2012 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 GON4LQ3T8J9 2241 aa20.41■□□□□ 0.86
UBXN1-212ENST00000531625 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 LDHAP00338 332 aaKnown RBP20.4■□□□□ 0.86
UBXN1-212ENST00000531625 GAP43P17677 238 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 ACAT1P24752 427 aaKnown RBP20.4■□□□□ 0.86
UBXN1-212ENST00000531625 PCSK1P29120 753 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 MAGEA11P43364 429 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 ATRXP46100 2492 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 KCNA1Q09470 495 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 L1TD1Q5T7N2 865 aaKnown RBP20.4■□□□□ 0.86
UBXN1-212ENST00000531625 RRAGBQ5VZM2 374 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 RESP18Q5W5W9 173 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 DYMQ7RTS9 669 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 OSTM1Q86WC4 334 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 SPATA2LQ8IUW3 424 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-212ENST00000531625 CSGALNACT2Q8N6G5 542 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 SH3RF2Q8TEC5 729 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 ACCSQ96QU6 501 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 MRPL44Q9H9J2 332 aaKnown RBP20.4■□□□□ 0.86
UBXN1-212ENST00000531625 STK17AQ9UEE5 414 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 ARHGAP26Q9UNA1 814 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 MYO16Q9Y6X6 1858 aa20.4■□□□□ 0.86
UBXN1-212ENST00000531625 KIAA1549LQ6ZVL6 1849 aa20.39■□□□□ 0.86
UBXN1-212ENST00000531625 PFKLP17858 780 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 GARTP22102 1010 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 DGKEP52429 567 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 PSMD2Q13200 908 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 USP39Q53GS9 565 aaKnown RBP20.39■□□□□ 0.85
UBXN1-212ENST00000531625 PSAPL1Q6NUJ1 521 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 FAM171BQ6P995 826 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 CCDC73Q6ZRK6 1079 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 ADGRF2Q8IZF7 708 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 PDILTQ8N807 584 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 ARL14EPQ8N8R7 260 aaPredicted RBP20.39■□□□□ 0.85
UBXN1-212ENST00000531625 ZSWIM2Q8NEG5 633 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 TSTD1Q8NFU3 115 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 USP33Q8TEY7 942 aa20.39■□□□□ 0.85
UBXN1-212ENST00000531625 SAAL1Q96ER3 474 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms