RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 PPP1R3BQ86XI6 285 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 PCSK9Q8NBP7 692 aaKnown RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 SMRP1Q8NCR6 262 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 VCPIP1Q96JH7 1222 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 MARK4Q96L34 752 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 LENG8Q96PV6 779 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 PTDSS2Q9BVG9 487 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 WDCPQ9H6R7 721 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 FEZ2Q9UHY8 353 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 MCM8Q9UJA3 840 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 FNDC1Q4ZHG4 1894 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 LY6G6EA0A0G2JKS1 128 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 FZD9O00144 591 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 ARIH2O95376 493 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 CHRM5P08912 532 aaPredicted RBP5.78□□□□□ -1.48
PTPRK-220ENST00000531466 ATXN1LP0C7T5 689 aaKnown RBP5.78□□□□□ -1.48
PTPRK-220ENST00000531466 RENBPP51606 427 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 ALDH5A1P51649 535 aaPredicted RBP5.78□□□□□ -1.48
PTPRK-220ENST00000531466 TBC1D25Q3MII6 688 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 ACRBPQ8NEB7 543 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 SNX18Q96RF0 628 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 THAP7Q9BT49 309 aaPredicted RBP5.78□□□□□ -1.48
PTPRK-220ENST00000531466 EFHD1Q9BUP0 239 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 CIPCQ9C0C6 399 aa5.78□□□□□ -1.48
PTPRK-220ENST00000531466 FAM90A10PA6NDY2 464 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 DSCR3O14972 297 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 TJP3O95049 919 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 TMEM191BP0C7N4 346 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 FPR3P25089 353 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 ADKP55263 362 aaKnown RBP5.77□□□□□ -1.49
PTPRK-220ENST00000531466 IQCB1Q15051 598 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 SYDE2Q5VT97 1194 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 NECAB2Q7Z6G3 386 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRK-220ENST00000531466 CUL5Q93034 780 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 TRHDEQ9UKU6 1024 aa5.77□□□□□ -1.49
PTPRK-220ENST00000531466 ERC2O15083 957 aa5.76□□□□□ -1.49
PTPRK-220ENST00000531466 ALPLP05186 524 aa5.76□□□□□ -1.49
PTPRK-220ENST00000531466 HOXD9P28356 352 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 EXOSC9Q06265 439 aaKnown RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 EFCAB2Q5VUJ9 269 aa5.76□□□□□ -1.49
PTPRK-220ENST00000531466 PNMA8AQ86V59 439 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 FOXP1Q9H334 677 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 NDRG4Q9ULP0 352 aaKnown RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
PTPRK-220ENST00000531466 PCDHA1Q9Y5I3 950 aa5.76□□□□□ -1.49
PTPRK-220ENST00000531466 CD8B2A6NJW9 211 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 KCNJ5P48544 419 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 THBS3P49746 956 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 RGS19P49795 217 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 HK3P52790 923 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 HTRA4P83105 476 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-220ENST00000531466 E2F2Q14209 437 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 DEPDC1Q5TB30 811 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 MEX3CQ5U5Q3 659 aaKnown RBP5.75□□□□□ -1.49
PTPRK-220ENST00000531466 ZNF813Q6ZN06 617 aa5.75□□□□□ -1.49
PTPRK-220ENST00000531466 CCDC8Q9H0W5 538 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-220ENST00000531466 TCRBV5S1A1TA0A578 114 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 SHTN1A0MZ66 631 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 hCG_1984214I3L0E3 225 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 ABLIM3O94929 683 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 UNC5CO95185 931 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 DLDP09622 509 aaKnown RBP5.74□□□□□ -1.49
PTPRK-220ENST00000531466 NANOS2P60321 138 aaKnown RBP5.74□□□□□ -1.49
PTPRK-220ENST00000531466 GHRHRQ02643 423 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 ODF1Q14990 250 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 C10orf25Q5T742 122 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 THEMIS2Q5TEJ8 643 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 PUS7Q96PZ0 661 aaKnown RBP5.74□□□□□ -1.49
PTPRK-220ENST00000531466 LMBRD1Q9NUN5 540 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 GABRQQ9UN88 632 aa5.74□□□□□ -1.49
PTPRK-220ENST00000531466 MRPS17Q9Y2R5 130 aaKnown RBP5.74□□□□□ -1.49
PTPRK-220ENST00000531466 FTLP02792 175 aaPredicted RBP5.73□□□□□ -1.49
PTPRK-220ENST00000531466 CYP19A1P11511 503 aaPredicted RBP5.73□□□□□ -1.49
PTPRK-220ENST00000531466 TYRP14679 529 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 HTR6P50406 440 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 TWIST1Q15672 202 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 FAM187BQ17R55 369 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 LEXMQ3ZCV2 418 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 RNASE12Q5GAN4 147 aaKnown RBP5.73□□□□□ -1.49
PTPRK-220ENST00000531466 DPY19L3Q6ZPD9 716 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 SLC15A3Q8IY34 581 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 SOCS4Q8WXH5 440 aa5.73□□□□□ -1.49
PTPRK-220ENST00000531466 TMEM232C9JQI7 657 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 AP4M1O00189 453 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 OAZ2O95190 189 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 VNN1O95497 513 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 HDCP19113 662 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 KRT85P78386 507 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 E2F1Q01094 437 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 CYP1B1Q16678 543 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 MTHFD1LQ6UB35 978 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 MIER2Q8N344 545 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 MTMR8Q96EF0 704 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 MMS19Q96T76 1030 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 DPCDQ9BVM2 203 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms