RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ITGB3P05106 788 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ADRB2P07550 413 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 PLCG1P19174 1290 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 POLR2BP30876 1174 aaKnown RBP9.92□□□□□ -0.82
NEDD8-206ENST00000531430 GRIK1P39086 918 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 LMAN2Q12907 356 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ZNF77Q15935 545 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 CRY1Q16526 586 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 EMC10Q5UCC4 262 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 C19orf48Q6RUI8 117 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 PDCL2Q8N4E4 241 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ALLCQ8N6M5 410 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 TXNDC5Q8NBS9 432 aaKnown RBP9.92□□□□□ -0.82
NEDD8-206ENST00000531430 MDGA1Q8NFP4 955 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 USP33Q8TEY7 942 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 CACTINQ8WUQ7 758 aaKnown RBP9.92□□□□□ -0.82
NEDD8-206ENST00000531430 HMGB4Q8WW32 186 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ERLEC1Q96DZ1 483 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ZNF560Q96MR9 790 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 FAM213AQ9BRX8 229 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM74BQ9NUR3 256 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 KLK13Q9UKR3 277 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 SNX9Q9Y5X1 595 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 TCHHQ07283 1943 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ATXN2Q99700 1313 aaKnown RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 NUP205Q92621 2012 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 H3BQV1 296 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 HCRTO43612 131 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 NOL4O94818 638 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 PIGRP01833 764 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 PDGFRBP09619 1106 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 ENGP17813 658 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 PNPLA4P41247 253 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 PTGER3P43115 390 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 ATP2C1P98194 919 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 IFRD2Q12894 506 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 CCDC142Q17RM4 750 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM119Q4V9L6 283 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 RILPL1Q5EBL4 403 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 INTS6LQ5JSJ4 861 aaKnown RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 HYIQ5T013 277 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM92Q6UXU6 159 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 FILIP1Q7Z7B0 1213 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 CHCHD4Q8N4Q1 142 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 CNOT6LQ96LI5 555 aaKnown RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 PNKPQ96T60 521 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 ACBD6Q9BR61 282 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM206Q9H813 350 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 SMPD4Q9NXE4 827 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TRPM5Q9NZQ8 1165 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 TBC1D7Q9P0N9 293 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 MAGEC2Q9UBF1 373 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-206ENST00000531430 MMP17Q9ULZ9 603 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 L1RE1Q9UN81 338 aa9.91□□□□□ -0.82
NEDD8-206ENST00000531430 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 AKAP13Q12802 2813 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ASCC3Q8N3C0 2202 aaKnown RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SGK1O00141 431 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 LEFTY2O00292 366 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ATP2C2O75185 946 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 TADA3O75528 432 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 IL18RAPO95256 599 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 APODP05090 189 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 BDNFP23560 247 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ITPKAP23677 461 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ANXA13P27216 316 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 OPRD1P41143 372 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 WASP42768 502 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 MRPS21P82921 87 aaKnown RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 GTF2BQ00403 316 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 CYP27A1Q02318 531 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 BYSLQ13895 437 aaKnown RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 POSTNQ15063 836 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 LYSMD4Q5XG99 296 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SCARA3Q6AZY7 606 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 OSTM1Q86WC4 334 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SYT12Q8IV01 421 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SFTPA1Q8IWL2 248 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SYCP3Q8IZU3 236 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 KCTD17Q8N5Z5 321 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 NAT16Q8N8M0 369 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 GATA6Q92908 595 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 SAAL1Q96ER3 474 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ARHGEF4Q9NR80 690 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 MBD1Q9UIS9 605 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-206ENST00000531430 WASF3Q9UPY6 502 aa9.9□□□□□ -0.82
NEDD8-206ENST00000531430 ZZEF1O43149 2961 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms