RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 DRD1P21728 446 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 GJA4P35212 333 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 PSMC1P62191 440 aaKnown RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 ZNF77Q15935 545 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 NAIF1Q69YI7 327 aaPredicted RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 OSCP1Q8WVF1 389 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 GAB3Q8WWW8 586 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 ECT2Q9H8V3 914 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 C2orf78A6NCI8 922 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 SPTLC2O15270 562 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 PDGFRBP09619 1106 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 IFNAR2P48551 515 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 ASIC1P78348 528 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 USP4Q13107 963 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 VSTM1Q6UX27 236 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 EPM2AIP1Q7L775 607 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 TRAPPC11Q7Z392 1133 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 ARL14EPQ8N8R7 260 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 ZNF507Q8TCN5 953 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 SH3RF2Q8TEC5 729 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 EXOC4Q96A65 974 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 SPATA17Q96L03 361 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 CUEDC2Q9H467 287 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 ANK1P16157 1881 aa13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-211ENST00000531406 AXIN1O15169 862 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 GDF9O60383 454 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 PPP6R2O75170 966 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 TCF3P15923 654 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 HDCP19113 662 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 BDNFP23560 247 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 GRIK1P39086 918 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 AMPD3Q01432 767 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 KCNB1Q14721 858 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 EML3Q32P44 896 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 FBXO43Q4G163 708 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 CNNM4Q6P4Q7 775 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 CAMKK1Q8N5S9 505 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 IQUBQ8NA54 791 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 EZH1Q92800 747 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 ATP2A3Q93084 1043 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 DHX58Q96C10 678 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 CEP295NLQ96MC4 621 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 ZNF396Q96N95 335 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 MMS19Q96T76 1030 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 ARRDC1-AS1Q9H2J1 176 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 AGPAT3Q9NRZ7 376 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
TM9SF1-211ENST00000531406 AKAP3O75969 853 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 DLATP10515 647 aaKnown RBP13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 RAP1GAPP47736 663 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 USP46P62068 366 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 NUCB2P80303 420 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 NR1H3Q13133 447 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 PSMD6Q15008 389 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 SHC4Q6S5L8 630 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 CD101Q93033 1021 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 C7orf25Q9BPX7 421 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 LINC00597Q9H2U6 94 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 SNX25Q9H3E2 840 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
TM9SF1-211ENST00000531406 CLIC2O15247 247 aa13.67□□□□□ -0.22
TM9SF1-211ENST00000531406 CUTAO60888 179 aa13.67□□□□□ -0.22
TM9SF1-211ENST00000531406 TACC1O75410 805 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms