RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FOXP3Q9BZS1 431 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MIS12Q9H081 205 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ASB7Q9H672 318 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 AKTIPQ9H8T0 292 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 SUGCTQ9HAC7 445 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ZCCHC17Q9NP64 241 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 TOPORSQ9NS56 1045 aaPredicted RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 PARVAQ9NVD7 372 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA6AQ9NYA3 693 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TAS2R14Q9NYV8 317 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 EHD2Q9NZN4 543 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ANKFY1Q9P2R3 1169 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 CNOT8Q9UFF9 292 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 MTRF1LQ9UGC7 380 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 STRIP2Q9ULQ0 834 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 NFU1Q9UMS0 254 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PACSIN2Q9UNF0 486 aaPredicted RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 COG5Q9UP83 839 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 FAN1Q9Y2M0 1017 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 IVNS1ABPQ9Y6Y0 642 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PLXNA1Q9UIW2 1896 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PASKQ96RG2 1323 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ZNFX1Q9P2E3 1918 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 PLXNB2O15031 1838 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 RRN3P2A6NIE6 340 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 A6NJR5 290 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 F8W735 103 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 AGPSO00116 658 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ABLIM1O14639 778 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ZEB2O60315 1214 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PPFIA2O75334 1257 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PROSCO94903 275 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 VNN1O95497 513 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 C22orf31O95567 290 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 GAS8O95995 478 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PAEPP09466 180 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 WEE2P0C1S8 567 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 TMEM191BP0C7N4 346 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 COMTP21964 271 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 GNA15P30679 374 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 PTPN7P35236 360 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ACTN2P35609 894 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ACOT2P49753 483 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 DNA2P51530 1060 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SOX10P56693 466 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 GSCP56915 257 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 NOMO3P69849 1222 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 TRPC3Q13507 836 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 MESDQ14696 234 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SLMAPQ14BN4 828 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SETDB1Q15047 1291 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 LY6KQ17RY6 165 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ZNF792Q3KQV3 632 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 HSDL1Q3SXM5 330 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 COX20Q5RI15 118 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ATF7IP2Q5U623 682 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 DCAF12L1Q5VU92 463 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PLEKHA7Q6IQ23 1121 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 Q6ZS46 218 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ARMCX2Q7L311 632 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 TRMT1LQ7Z2T5 733 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SLC13A5Q86YT5 568 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 KATNAL2Q8IYT4 538 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 RGL4Q8IZJ4 473 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 IL22RA1Q8N6P7 574 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 RNF149Q8NC42 400 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 RBBP8NLQ8NC74 664 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 TMEM35BQ8NCS4 154 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 BBOF1Q8ND07 529 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 EXD1Q8NHP7 514 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 IFT81Q8WYA0 676 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ALG3Q92685 438 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 RBM41Q96IZ5 413 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 CLMNQ96JQ2 1002 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PARK7Q99497 189 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 FMO2Q99518 471 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 POP1Q99575 1024 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 SYT17Q9BSW7 474 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 TCHPQ9BT92 498 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 FRMD8P1Q9BZ68 369 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 DNAI2Q9GZS0 605 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 FAM107BQ9H098 131 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 DDX47Q9H0S4 455 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 STMN4Q9H169 189 aaPredicted RBP5.9□□□□□ -1.46
PCF11-205ENST00000530906 LRRC19Q9H756 370 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 FAM204AQ9H8W3 233 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 CYP3A43Q9HB55 503 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PTPRHQ9HD43 1115 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 TXNRD2Q9NNW7 524 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SMARCAL1Q9NZC9 954 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 WDR35Q9P2L0 1181 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 IP6K2Q9UHH9 426 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms