RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 TNNC1P63316 161 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 SATB1Q01826 763 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 FAM160A1Q05DH4 1040 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 TRPC3Q13507 836 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 RUNX3Q13761 415 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 CCINQ13939 588 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
RPS3-216ENST00000530721 Q6ZS52 159 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 SPATA17Q96L03 361 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 TRPC7Q9HCX4 862 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 HPS4Q9NQG7 708 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 SERTAD1Q9UHV2 236 aa13.7□□□□□ -0.22
RPS3-216ENST00000530721 DMXL1Q9Y485 3027 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 TRAV19A0A0A6YYK7 116 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 TRIM66O15016 1216 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 KLRC4O43908 158 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 CKMP06732 381 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 USP17L7P0C7H9 530 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 BDNFP23560 247 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 ANXA13P27216 316 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 ATICP31939 592 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 GNL1P36915 607 aaPredicted RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 GRIK1P39086 918 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 AMPD2Q01433 879 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 CYP27A1Q02318 531 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 ERMP1Q7Z2K6 904 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 RIN3Q8TB24 985 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 ZNF516Q92618 1163 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
RPS3-216ENST00000530721 EBF3Q9H4W6 596 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
RPS3-216ENST00000530721 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 OTOL1A6NHN0 477 aaPredicted RBP13.68□□□□□ -0.22
RPS3-216ENST00000530721 PFKFB1P16118 471 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 CMA1P23946 247 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 PDE6CP51160 858 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 AP3M2P53677 418 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 MYL6P60660 151 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 GRSF1Q12849 480 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPS3-216ENST00000530721 STK4Q13043 487 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 USP4Q13107 963 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 PSMD2Q13200 908 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 KCNB1Q14721 858 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 MTF1Q14872 753 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 ZNF77Q15935 545 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 TMEM196Q5HYL7 178 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 MDH1BQ5I0G3 518 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 DENND5BQ6ZUT9 1274 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 KIAA0895Q8NCT3 520 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 PAGE5Q96GU1 130 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 SLC22A12Q96S37 553 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 CYP2S1Q96SQ9 504 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 EHD2Q9NZN4 543 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 PTPRDP23468 1912 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 GREB1Q4ZG55 1949 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 ANAPC1Q9H1A4 1944 aa13.68□□□□□ -0.22
RPS3-216ENST00000530721 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 C2orf78A6NCI8 922 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 K7ESF4 209 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
RPS3-216ENST00000530721 PHACTR2O75167 634 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 MYL1P05976 194 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 ARSAP15289 507 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 PFKLP17858 780 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 PTPN1P18031 435 aaKnown RBP13.67□□□□□ -0.22
RPS3-216ENST00000530721 CASP4P49662 377 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 KRT85P78386 507 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 BIRC3Q13489 604 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 CPA6Q8N4T0 437 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
RPS3-216ENST00000530721 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 OSCP1Q8WVF1 389 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 XYLT2Q9H1B5 865 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms