RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TSPY8P0CW00 308 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 CYP2C9P11712 490 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 KLRK1P26718 216 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 ARPC4P59998 168 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 INAQ16352 499 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 NANOGP8Q6NSW7 305 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 HPS6Q86YV9 775 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 HSPH1Q92598 858 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 NHSL1Q5SYE7 1610 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 IPO5O00410 1097 aaKnown RBP14.77□□□□□ -0.05
PCF11-204ENST00000530660 TBC1D12O60347 775 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 FAM58BPP0C7Q3 252 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 S100A1P23297 94 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 CDK9P50750 372 aaKnown RBP14.77□□□□□ -0.05
PCF11-204ENST00000530660 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 ZCCHC9Q8N567 271 aaKnown RBP14.77□□□□□ -0.05
PCF11-204ENST00000530660 TRIML2Q8N7C3 387 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 ZNF564Q8TBZ8 553 aaPredicted RBP14.77□□□□□ -0.05
PCF11-204ENST00000530660 DDI1Q8WTU0 396 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.05
PCF11-204ENST00000530660 PIGSQ96S52 555 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 ZNF287Q9HBT7 754 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 PLK2Q9NYY3 685 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 VPS51Q9UID3 782 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 PACSIN3Q9UKS6 424 aa14.77□□□□□ -0.05
PCF11-204ENST00000530660 POTEB3A0JP26 581 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 PEX1O43933 1283 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 TGDSO95455 350 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 PHBP35232 272 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 ARHGAP4P98171 946 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CBWD6Q4V339 395 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CAVIN4Q5BKX8 364 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CBWD3Q5JTY5 395 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CBWD5Q5RIA9 395 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 DHRS4L2Q6PKH6 230 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 POTEBQ6S5H4 581 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 GSTA5Q7RTV2 222 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 RELL1Q8IUW5 271 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 IQCF2Q8IXL9 164 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 NSMCE3Q96MG7 304 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 RILPQ96NA2 401 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 RAB34Q9BZG1 259 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CCPG1Q9ULG6 757 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CROCCQ5TZA2 2017 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 EMSYQ7Z589 1322 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 MYO3BQ8WXR4 1341 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 GOLGA8MH3BSY2 632 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 PIK3CDO00329 1044 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 TKTP29401 623 aaKnown RBP14.76□□□□□ -0.05
PCF11-204ENST00000530660 YWHAGP61981 247 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCF11-204ENST00000530660 PEX6Q13608 980 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 OGFRL1Q5TC84 451 aaPredicted RBP14.76□□□□□ -0.05
PCF11-204ENST00000530660 FAM91A1Q658Y4 838 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 BANPQ8N9N5 519 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 TTC13Q8NBP0 860 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 BIRC8Q96P09 236 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 PCDHB18PQ96TA0 734 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CENPOQ9BU64 300 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CCDC106Q9BWC9 280 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 EBF1Q9UH73 591 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 TRIM49P0CI25 452 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 TRIM49CP0CI26 452 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 CDKL1Q00532 357 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 SBK1Q52WX2 424 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 XKR5Q6UX68 686 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 ANKS1BQ7Z6G8 1248 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 GRK7Q8WTQ7 553 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 RANBP9Q96S59 729 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 MECRQ9BV79 373 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 ANKRD36CQ5JPF3 1778 aa14.76□□□□□ -0.05
PCF11-204ENST00000530660 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 DGKIO75912 1065 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 PROCP04070 461 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 ETS1P14921 441 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 SSTR1P30872 391 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 AQP5P55064 265 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 DDHD1Q8NEL9 900 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 USP33Q8TEY7 942 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 PLEKHA8Q96JA3 519 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 Q9H521 79 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 GNEQ9Y223 722 aaKnown RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 POMPQ9Y244 141 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 ZNF142P52746 1687 aaPredicted RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 ERVV-1B6SEH8 477 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 CASQ2O14958 399 aaPredicted RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 LPXNO60711 386 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 PABPC1P11940 636 aaKnown RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 PPARGP37231 505 aaPredicted RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 CYP2A13Q16696 494 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 NOP9Q86U38 636 aaKnown RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 ALLCQ8N6M5 410 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 CCDC89Q8N998 374 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 SREK1Q8WXA9 508 aaKnown RBP14.75□□□□□ -0.05
PCF11-204ENST00000530660 ACAP3Q96P50 834 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 EBF4Q9BQW3 602 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 ANLNQ9NQW6 1124 aa14.75□□□□□ -0.05
PCF11-204ENST00000530660 MAN1C1Q9NR34 630 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms