RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SLC12A3P55017 1021 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 ZNF445P59923 1031 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 MGAT3Q09327 533 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 MRPL58Q14197 206 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 EMC2Q15006 297 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 XKR9Q5GH70 373 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 TAF2Q6P1X5 1199 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 KIAA0319LQ8IZA0 1049 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 RNF34Q969K3 372 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 FERD3LQ96RJ6 166 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 PLIN2Q99541 437 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 GDF15Q99988 308 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 WNT8AQ9H1J5 351 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 BHMT2Q9H2M3 363 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 TMPRSS5Q9H3S3 457 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 GOLPH3LQ9H4A5 285 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 MAGEB2O15479 319 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 USO1O60763 962 aaKnown RBP9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 CAND2O75155 1236 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 PLA2G4BP0C869 781 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 ATF2P15336 505 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 PFKFB1P16118 471 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 MAPK7Q13164 816 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 GPNMBQ14956 572 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 C1orf186Q6ZWK4 172 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 DAW1Q8N136 415 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 LRRC71Q8N4P6 559 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 CAGE1Q8TC20 777 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 ALG3Q92685 438 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 RAD54LQ92698 747 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 CALML4Q96GE6 196 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 NUDT5Q9UKK9 219 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 DNM3Q9UQ16 869 aa9.67□□□□□ -0.86
CCDC90B-217ENST00000530253 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 ARHGEF35A5YM69 484 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 CKBP12277 381 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 CYP11B2P19099 503 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 CD247P20963 164 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 POLGP54098 1239 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 TCEAL1Q15170 157 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 RINT1Q6NUQ1 792 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 EFCAB12Q6NXP0 572 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 CCDC73Q6ZRK6 1079 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 B3GNT8Q7Z7M8 397 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 PDILTQ8N807 584 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 FSIP1Q8NA03 581 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 ENGASEQ8NFI3 743 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 DNAJB3Q8WWF6 145 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 MRPS27Q92552 414 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 LARP4BQ92615 738 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 CDK5RAP3Q96JB5 506 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 FCRL3Q96P31 734 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 HIPK3Q9H422 1215 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 LOXHD1Q8IVV2 1947 aa9.66□□□□□ -0.86
CCDC90B-217ENST00000530253 GPR32O75388 356 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 TIMP1P01033 207 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 CHRNA1P02708 482 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 VTNP04004 478 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 CD3EP07766 207 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 TACR1P25103 407 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 CYP2C18P33260 490 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 ARL2P36404 184 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 THPOP40225 353 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 STAT6P42226 847 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 NDUFA8P51970 172 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 MRPS6P82932 125 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 BFSP2Q13515 415 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 RRAGBQ5VZM2 374 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 EEF1DP3Q658K8 133 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 LRRC8DQ7L1W4 858 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 PPFIBP1Q86W92 1011 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 MCPH1Q8NEM0 835 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 TMEM143Q96AN5 459 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 DHX58Q96C10 678 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 TSPAN17Q96FV3 270 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 JPH2Q9BR39 696 aaPredicted RBP9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 HCFC2Q9Y5Z7 792 aa9.65□□□□□ -0.86
CCDC90B-217ENST00000530253 MYMKA6NI61 221 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 POLR2DO15514 142 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 NBNO60934 754 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CXCL10P02778 98 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 RPLP2P05387 115 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 ASGR2P07307 311 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 IQCF3P0C7M6 154 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 GLRA2P23416 452 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 GPC3P51654 580 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CCL23P55773 120 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CAPSQ13938 189 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms