RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 KIZQ2M2Z5 673 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 FBXO25Q8TCJ0 367 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 BTN2A2Q8WVV5 523 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 TMEM143Q96AN5 459 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 SH3KBP1Q96B97 665 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 TMEM169Q96HH4 297 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 WNK4Q96J92 1243 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 SH3GL1Q99961 368 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 ZCWPW1Q9H0M4 648 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 DUX4Q9UBX2 424 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 CDYLQ9Y232 598 aa8.29□□□□□ -1.08
CTNND1-222ENST00000529919 DGAT1O75907 488 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 DLGAP3O95886 979 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 RGS7P49802 495 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 FKBP1CQ5VVH2 108 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 MFN1Q8IWA4 741 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 FBXO16Q8IX29 292 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 EPS8L3Q8TE67 593 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CASKIN2Q8WXE0 1202 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 SGF29Q96ES7 293 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CAPNS2Q96L46 248 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 ARHGEF38Q9NXL2 777 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PAK5Q9P286 719 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PCDHB2Q9Y5E7 798 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 C17orf102A2RUQ5 167 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 IRF6O14896 467 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 STAG3L1P0CL83 205 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 LCP1P13796 627 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 FGFR2P21802 821 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 COILP38432 576 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 FKBP1BP68106 108 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 KCNMA1Q12791 1236 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PIGHQ14442 188 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 XRRA1Q6P2D8 792 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 GPR141Q7Z602 305 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CNPY4Q8N129 248 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 C3orf20Q8ND61 904 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 ASAP3Q8TDY4 903 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 DDI1Q8WTU0 396 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 LACRTQ9GZZ8 138 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 SLC16A3O15427 465 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 GRAP2O75791 330 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 RASSF9O75901 435 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PRKCBP05771 671 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 RALAP11233 206 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PSMC3P17980 439 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CDK17Q00537 523 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 TBL3Q12788 808 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 STX5Q13190 355 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 MAPRE1Q15691 268 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 SMTNL2Q2TAL5 461 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CEP78Q5JTW2 689 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 TRAPPC11Q7Z392 1133 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 DEFB128Q7Z7B8 93 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 SLC13A5Q86YT5 568 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 CCDC60Q8IWA6 550 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 RBBP8NLQ8NC74 664 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PPHLN1Q8NEY8 458 aaKnown RBP8.28□□□□□ -1.08
CTNND1-222ENST00000529919 ENGASEQ8NFI3 743 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 AFG1LQ8WV93 481 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 MTERF3Q96E29 417 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 KAZALD1Q96I82 304 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 PLEKHA8Q96JA3 519 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 YME1L1Q96TA2 773 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 EHD4Q9H223 541 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 XPNPEP3Q9NQH7 507 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 USE1Q9NZ43 259 aa8.28□□□□□ -1.08
CTNND1-222ENST00000529919 POLBP06746 335 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 GTF2H3Q13889 308 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 EPC2Q52LR7 807 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 APLFQ8IW19 511 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-222ENST00000529919 USP33Q8TEY7 942 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 ZNF669Q96BR6 464 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-222ENST00000529919 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 SNX13Q9Y5W8 968 aa8.27□□□□□ -1.08
CTNND1-222ENST00000529919 PDS5AQ29RF7 1337 aaKnown RBP8.27□□□□□ -1.08
CTNND1-222ENST00000529919 C5orf58C9J3I9 102 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 HSPA13P48723 471 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 AP3M2P53677 418 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 GEMIN4P57678 1058 aaKnown RBP8.27□□□□□ -1.09
CTNND1-222ENST00000529919 ERVK-24P63145 666 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 CACNB2Q08289 660 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-222ENST00000529919 SNRNP35Q16560 246 aaKnown RBP8.27□□□□□ -1.09
CTNND1-222ENST00000529919 PLEKHA7Q6IQ23 1121 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 APOBEC3HQ6NTF7 200 aaKnown RBP8.27□□□□□ -1.09
CTNND1-222ENST00000529919 LRRC71Q8N4P6 559 aa8.27□□□□□ -1.09
CTNND1-222ENST00000529919 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms