RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 PACS1Q6VY07 963 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 RNF169Q8NCN4 708 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
CTR9-205ENST00000529898 NEK9Q8TD19 979 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 TBC1D5Q92609 795 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 TAF4BQ92750 862 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 LRRC45Q96CN5 670 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 UBXN6Q9BZV1 441 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 DHX36Q9H2U1 1008 aaKnown RBP4.4□□□□□ -1.71
CTR9-205ENST00000529898 TMEM74BQ9NUR3 256 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 KLHL11Q9NVR0 708 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 ARGLU1Q9NWB6 273 aaPredicted RBP4.4□□□□□ -1.71
CTR9-205ENST00000529898 SEPT10Q9P0V9 454 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 ANKFY1Q9P2R3 1169 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 MAFFQ9ULX9 164 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 SHANK2Q9UPX8 1470 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 PRDM15P57071 1507 aaPredicted RBP4.4□□□□□ -1.71
CTR9-205ENST00000529898 ZMYM4Q5VZL5 1548 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 ELP1O95163 1332 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 ARHGEF5Q12774 1597 aa4.4□□□□□ -1.71
CTR9-205ENST00000529898 PREX2Q70Z35 1606 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 SPHKAPQ2M3C7 1700 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ENO4A6NNW6 628 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 KIF3BO15066 747 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 TTI1O43156 1089 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 STAM2O75886 525 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 SPDEFO95238 335 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
CTR9-205ENST00000529898 ELANEP08246 267 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 HKR1P10072 659 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 CPEP16870 476 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 POU3F3P20264 500 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 MCM3P25205 808 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 PTPN7P35236 360 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 GCKP35557 465 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 DDIT3P35638 169 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 AVPR1BP47901 424 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 CCT8P50990 548 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 SEC24CP53992 1094 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 USP14P54578 494 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 CSE1LP55060 971 aaKnown RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 ERVK-21P61565 698 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ROR2Q01974 943 aaKnown RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 NSUN2Q08J23 767 aaKnown RBP eCLIP4.39□□□□□ -1.71
CTR9-205ENST00000529898 MGAT2Q10469 447 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 WASHC5Q12768 1159 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 COX10Q12887 443 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 FOXI1Q12951 378 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ZBTB17Q13105 803 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 LRRC23Q53EV4 343 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 BOLA3Q53S33 107 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 EFCAB2Q5VUJ9 269 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ARHGAP22Q7Z5H3 698 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 NDUFAF2Q8N183 169 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.39□□□□□ -1.71
CTR9-205ENST00000529898 MAML1Q92585 1016 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ARHGAP45Q92619 1136 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 PPP2R3CQ969Q6 453 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 CYFIP2Q96F07 1278 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ERO1AQ96HE7 468 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 BOD1Q96IK1 185 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 RUFY1Q96T51 708 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 NAP1L4Q99733 375 aaKnown RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 ACE2Q9BYF1 805 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 BRD8Q9H0E9 1235 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 QRSL1Q9H0R6 528 aaKnown RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 VCX3BQ9H321 246 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 MMADHCQ9H3L0 296 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 ZNF277Q9NRM2 450 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 MOCS1Q9NZB8 636 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 RABL2AQ9UBK7 228 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 TMCC3Q9ULS5 477 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 ATP11BQ9Y2G3 1177 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 SIK3Q9Y2K2 1263 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 LUC7L2Q9Y383 392 aaKnown RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 TMED5Q9Y3A6 229 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 USP15Q9Y4E8 981 aaPredicted RBP4.39□□□□□ -1.71
CTR9-205ENST00000529898 TTLL3Q9Y4R7 772 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 PTPRCP08575 1304 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 CCDC171Q6TFL3 1326 aa4.39□□□□□ -1.71
CTR9-205ENST00000529898 BLMP54132 1417 aaPredicted RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 CEP152O94986 1710 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 ABCC10Q5T3U5 1492 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 CLASP1Q7Z460 1538 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 GPATCH8Q9UKJ3 1502 aaKnown RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 TARSL2A2RTX5 802 aaKnown RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 ZAR1LA6NP61 321 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 PRKD3O94806 890 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 TGFB3P10600 412 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 GCSHP23434 173 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 CCT6AP40227 531 aaKnown RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 WASP42768 502 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 SLC6A9P48067 706 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 FNTAP49354 379 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 CLK3P49761 638 aaKnown RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 CCNHP51946 323 aaPredicted RBP4.38□□□□□ -1.71
CTR9-205ENST00000529898 ZNF131P52739 623 aa4.38□□□□□ -1.71
CTR9-205ENST00000529898 SLC5A3P53794 718 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms