RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 YY1P25490 414 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 GNA15P30679 374 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 PSMC4P43686 418 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 ARFIP2P53365 341 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 GCNT1Q02742 428 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 LIN52Q52LA3 116 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 EAPPQ56P03 285 aaPredicted RBP14.88□□□□□ -0.03
USP48-213ENST00000529637 MSTO1Q9BUK6 570 aa14.88□□□□□ -0.03
USP48-213ENST00000529637 CREB3O43889 395 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 RARBP10826 455 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 BPIFB4P59827 614 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 ENOSF1Q7L5Y1 443 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 TAB3Q8N5C8 712 aaPredicted RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 GPRASP2Q96D09 838 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 NMUR2Q9GZQ4 415 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 MANSC1Q9H8J5 431 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 DDX43Q9NXZ2 648 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 DNPEPQ9ULA0 475 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 UMODL1Q5DID0 1318 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 E5RJQ4 531 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 PMM2O15305 246 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 EXTL3O43909 919 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 ANPEPP15144 967 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 SSTR1P30872 391 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 GRIA2P42262 883 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 SLC18A1P54219 525 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 WNT7BP56706 349 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 EMC2Q15006 297 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 ZBTB41Q5SVQ8 909 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 TDRD10Q5VZ19 366 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 TDRPQ86YL5 185 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 HAUS1Q96CS2 278 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 PPM1HQ9ULR3 514 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 FAM237BA0A1B0GVD1 139 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 H3BRJ5 948 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 TLR3O15455 904 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 OR6B1O95007 311 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 GARTP22102 1010 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 GTF2H1P32780 548 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 MAN1A1P33908 653 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 GPX6P59796 221 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 MYBPC3Q14896 1274 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 CCNG2Q16589 344 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 FAM182AQ5T1J6 154 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 NCSTNQ92542 709 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 PANX3Q96QZ0 392 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 TRIM55Q9BYV6 548 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 C17orf75Q9HAS0 396 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 GALNT8Q9NY28 637 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 MAP3K20Q9NYL2 800 aaKnown RBP14.87□□□□□ -0.03
USP48-213ENST00000529637 PHF24Q9UPV7 400 aa14.87□□□□□ -0.03
USP48-213ENST00000529637 hCG_2014768A0A024R1R8 64 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 B2RBV5 119 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 KCNA2P16389 499 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 ARL4CP56559 192 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 CFAP157Q5JU67 520 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 ZBTB33Q86T24 672 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 TREML1Q86YW5 311 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 SAMD3Q8N6K7 520 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 ACSF2Q96CM8 615 aaPredicted RBP14.86□□□□□ -0.03
USP48-213ENST00000529637 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 FBXL18Q96ME1 805 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 ECSITQ9BQ95 431 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 OSBPL8Q9BZF1 889 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 IMPG2Q9BZV3 1241 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
USP48-213ENST00000529637 MYL2P10916 166 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 TCF4P15884 667 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 BACE1P56817 501 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 CDK16Q00536 496 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 GPS1Q13098 491 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 TFDP1Q14186 410 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 ISLR2Q6UXK2 745 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 RIPOR1Q6ZS17 1223 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 TAS1R3Q7RTX0 852 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 KLHL23Q8NBE8 558 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 SLC7A3Q8WY07 619 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 FAM81BQ96LP2 452 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 TEPSINQ96N21 525 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 NR1H4Q96RI1 486 aaPredicted RBP14.86□□□□□ -0.03
USP48-213ENST00000529637 NTPCRQ9BSD7 190 aaKnown RBP14.86□□□□□ -0.03
USP48-213ENST00000529637 TSSK1BQ9BXA7 367 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 FBXO40Q9UH90 709 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 HACL1Q9UJ83 578 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
USP48-213ENST00000529637 FCHO1O14526 889 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 HNRNPCL1O60812 293 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 UNGP13051 313 aaPredicted RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 DSG3P32926 999 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ARSEP51690 589 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 DSG1Q02413 1049 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 CDC16Q13042 620 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 CUL2Q13617 745 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms