RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TXNDC5Q8NBS9 432 aaKnown RBP20.43■□□□□ 0.86
SSRP1-204ENST00000529002 GTPBP2Q9BX10 602 aaKnown RBP20.43■□□□□ 0.86
SSRP1-204ENST00000529002 RAB34Q9BZG1 259 aa20.43■□□□□ 0.86
SSRP1-204ENST00000529002 DPP3Q9NY33 737 aa20.43■□□□□ 0.86
SSRP1-204ENST00000529002 NOL7Q9UMY1 257 aaKnown RBP20.43■□□□□ 0.86
SSRP1-204ENST00000529002 STK24Q9Y6E0 443 aa20.43■□□□□ 0.86
SSRP1-204ENST00000529002 ASXL3Q9C0F0 2248 aa20.43■□□□□ 0.86
SSRP1-204ENST00000529002 LAMA5O15230 3695 aa20.43■□□□□ 0.86
SSRP1-204ENST00000529002 ITPR1Q14643 2758 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 FREM2Q5SZK8 3169 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 TNFRSF10BO14763 440 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 NOL4O94818 638 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 KLF8O95600 359 aaPredicted RBP20.42■□□□□ 0.86
SSRP1-204ENST00000529002 PLA2G4BP0C869 781 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 CHRM1P11229 460 aaPredicted RBP20.42■□□□□ 0.86
SSRP1-204ENST00000529002 TIE1P35590 1138 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 TRAPPC10P48553 1259 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 NEK4P51957 841 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 SMARCB1Q12824 385 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 NR1H3Q13133 447 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 KYAT1Q16773 422 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 COL28A1Q2UY09 1125 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 PDZD3Q86UT5 571 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 FBXO18Q8NFZ0 1043 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 FAM84AQ96KN4 292 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 TSPAN18Q96SJ8 248 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 IKZF4Q9H2S9 585 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 PTPRBP23467 1997 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 APC2O95996 2303 aa20.42■□□□□ 0.86
SSRP1-204ENST00000529002 LOC400499M0QZD8 3231 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 K7ENM7 598 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 SEC24BO95487 1268 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 PIGRP01833 764 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 SCAPQ12770 1279 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 MAP7D1Q3KQU3 841 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 SLC23A3Q6PIS1 610 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 CD302Q8IX05 232 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 IL17RCQ8NAC3 791 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 HMGB4Q8WW32 186 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 CAMK1GQ96NX5 476 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 TMEM206Q9H813 350 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 LARSQ9P2J5 1176 aaKnown RBP20.41■□□□□ 0.86
SSRP1-204ENST00000529002 PILRBQ9UKJ0 227 aa20.41■□□□□ 0.86
SSRP1-204ENST00000529002 GCN1Q92616 2671 aaKnown RBP20.41■□□□□ 0.86
SSRP1-204ENST00000529002 KPNA7A9QM74 516 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 TULP1O00294 542 aaPredicted RBP20.4■□□□□ 0.86
SSRP1-204ENST00000529002 PAX3P23760 479 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 ANAPC15P60006 121 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 TSPY1Q01534 308 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 DHX8Q14562 1220 aaKnown RBP20.4■□□□□ 0.86
SSRP1-204ENST00000529002 LYSMD4Q5XG99 296 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 DTHD1Q6ZMT9 781 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 OSTM1Q86WC4 334 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 C12orf40Q86WS4 652 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 MYRFLQ96LU7 910 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 REEP2Q9BRK0 252 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 CCSER1Q9C0I3 900 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 BCCIPQ9P287 314 aaKnown RBP eCLIP20.4■□□□□ 0.86
SSRP1-204ENST00000529002 UXTQ9UBK9 157 aaPredicted RBP20.4■□□□□ 0.86
SSRP1-204ENST00000529002 KCNG1Q9UIX4 513 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 GTF3C4Q9UKN8 822 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 DERAQ9Y315 318 aa20.4■□□□□ 0.86
SSRP1-204ENST00000529002 IGSF10Q6WRI0 2623 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 FAM221BA6H8Z2 402 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 NFATC1O95644 943 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 CYP17A1P05093 508 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 HDCP19113 662 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 WNT7BP56706 349 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 HYIQ5T013 277 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 RAB44Q7Z6P3 723 aaPredicted RBP20.39■□□□□ 0.85
SSRP1-204ENST00000529002 SCN4BQ8IWT1 228 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 MYCT1Q8N699 235 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 WHAMMQ8TF30 809 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 TRMT2BQ96GJ1 504 aaKnown RBP20.39■□□□□ 0.85
SSRP1-204ENST00000529002 SPACA7Q96KW9 195 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 BBC3Q96PG8 261 aaPredicted RBP20.39■□□□□ 0.85
SSRP1-204ENST00000529002 PKMYT1Q99640 499 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 L1RE1Q9UN81 338 aa20.39■□□□□ 0.85
SSRP1-204ENST00000529002 CELSR3Q9NYQ7 3312 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 SETXQ7Z333 2677 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 ADAM23O75077 832 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 ALDH1A2O94788 518 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 CD59P13987 128 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 ATXN3P54252 364 aaPredicted RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 RPL10AP62906 217 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 MRPS21P82921 87 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 KCNB1Q14721 858 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 NFE2Q16621 373 aaPredicted RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 PGBD3Q8N328 593 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 HDDC3Q8N4P3 179 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 PNPLA1Q8N8W4 532 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 DDX43Q9NXZ2 648 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 SLC6A14Q9UN76 642 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 C2CD2Q9Y426 696 aa20.38■□□□□ 0.85
SSRP1-204ENST00000529002 URB1O60287 2271 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 GOLGA4Q13439 2230 aaKnown RBP20.38■□□□□ 0.85
SSRP1-204ENST00000529002 SMG1Q96Q15 3661 aaKnown RBP20.37■□□□□ 0.85
SSRP1-204ENST00000529002 TCRBV21S2A2A0A5A6 115 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 UPK3BL1B0FP48 263 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms