RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 NOTUMQ6P988 496 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 ALKAL1Q6UXT8 129 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 CENPUQ71F23 418 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 TMEM110Q86TL2 294 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 EXOC3L1Q86VI1 746 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 CACNA2D3Q8IZS8 1091 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 CNPY4Q8N129 248 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 C2orf69Q8N8R5 385 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 ZNF317Q96PQ6 595 aaPredicted RBP11.24□□□□□ -0.61
PUF60-213ENST00000528999 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
PUF60-213ENST00000528999 TBCBQ99426 244 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 NSRP1Q9H0G5 558 aaKnown RBP11.24□□□□□ -0.61
PUF60-213ENST00000528999 SMYD3Q9H7B4 428 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 ACTR5Q9H9F9 607 aaPredicted RBP11.24□□□□□ -0.61
PUF60-213ENST00000528999 SLC24A2Q9UI40 661 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 CYTH4Q9UIA0 394 aa11.24□□□□□ -0.61
PUF60-213ENST00000528999 ZSWIM8A7E2V4 1837 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 CFAP69A5D8W1 941 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 C2CD4BA6NLJ0 364 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 DCDC2CA8MYV0 355 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PI4K2BG5E9Z4 385 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 GOLGA8SH3BPF8 625 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 APOC4-APOC2K7ER74 178 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 M0QYV0 167 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 GPR32O75388 356 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 GJB6O95452 261 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 APOC2P02655 101 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 CYP3A5P20815 502 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 NDST1P52848 882 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PLCB3Q01970 1234 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 SLC20A2Q08357 652 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 ITIH4Q14624 930 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 RNASEH2BQ5TBB1 312 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 KAZNQ674X7 775 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PPP1R21Q6ZMI0 780 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PIGWQ7Z7B1 504 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 TADA2BQ86TJ2 420 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 ANKS4BQ8N8V4 417 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 JOSD2Q8TAC2 188 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 EPS8L3Q8TE67 593 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 ATXN2LQ8WWM7 1075 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 ARHGEF2Q92974 986 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 PLCD4Q9BRC7 762 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 GBA2Q9HCG7 927 aaPredicted RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 CNTN3Q9P232 1028 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
PUF60-213ENST00000528999 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
PUF60-213ENST00000528999 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 CST8O60676 142 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 KPNA6O60684 536 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 FSBPO95073 299 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 ACSL3O95573 720 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 F2P00734 622 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 GHRP10912 638 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 GNAT1P11488 350 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 KCNE1P15382 129 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 MIPP30301 263 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 PHBP35232 272 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 GJC1P36383 396 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 ACADSBP45954 432 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 ARL4CP56559 192 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 GPS1Q13098 491 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 TRIP13Q15645 432 aaPredicted RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 LACTB2Q53H82 288 aaPredicted RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 MORN1Q5T089 497 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 ARHGEF18Q6ZSZ5 1173 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 DPH6Q7L8W6 267 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 SESTD1Q86VW0 696 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 RSAD2Q8WXG1 361 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 GRAMD1AQ96CP6 724 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 SNX27Q96L92 541 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 TWNKQ96RR1 684 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 SELENOSQ9BQE4 189 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 DDX23Q9BUQ8 820 aaKnown RBP11.22□□□□□ -0.61
PUF60-213ENST00000528999 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
PUF60-213ENST00000528999 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms