RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZC2HC1CQ53FD0 456 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 WDR44Q5JSH3 913 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 Q6ZS52 159 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 SFR1Q86XK3 245 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 TSC1Q92574 1164 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 B3GALT6Q96L58 329 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 ACAP3Q96P50 834 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CCDC94Q9BW85 323 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 DUSP15Q9H1R2 295 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 GOLGA2P5Q9HBQ8 144 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 RXFP1Q9HBX9 757 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 MRPL17Q9NRX2 175 aaKnown RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CNTN3Q9P232 1028 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 RCOR1Q9UKL0 485 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CITO14578 2027 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 GOLGA4Q13439 2230 aaKnown RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 ANKRD63C9JTQ0 380 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 TMEM189-UBE2V1I3L0A0 370 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 KHNYNO15037 678 aaKnown RBP9.18□□□□□ -0.94
SSBP3-212ENST00000528930 TADA2AO75478 443 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 URODP06132 367 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 ADRB2P07550 413 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 GP1BBP13224 206 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 TNFSF9P41273 254 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 STAT6P42226 847 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 FAM193AP78312 1265 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 CREB5Q02930 508 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 KCNA1Q09470 495 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 UPP1Q16831 310 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 UAP1L1Q3KQV9 507 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 RTP2Q5QGT7 225 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 PDXDC1Q6P996 788 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 GPR65Q8IYL9 337 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 PIP4K2CQ8TBX8 421 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 HASPINQ8TF76 798 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 AHCTF1Q8WYP5 2266 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 BICD1Q96G01 975 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 PLA2G2FQ9BZM2 168 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 IKZF4Q9H2S9 585 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 TRPV5Q9NQA5 729 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 TOPORSQ9NS56 1045 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-212ENST00000528930 KBTBD4Q9NVX7 518 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 SEL1LQ9UBV2 794 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 SSX2IPQ9Y2D8 614 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 STYXL1Q9Y6J8 313 aa9.18□□□□□ -0.94
SSBP3-212ENST00000528930 PLXND1Q9Y4D7 1925 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 SF3B1O75533 1304 aaKnown RBP eCLIP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 A0A0B4J269 797 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 B8ZZF3 427 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 TISP43B9A030 160 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 HNRNPDLO14979 420 aaKnown RBP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 CLTAP09496 248 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 CXCL8P10145 99 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 MYBP10242 640 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 GAP43P17677 238 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 ABCD1P33897 745 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 LIG4P49917 911 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 LRRC32Q14392 662 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 ZBTB6Q15916 424 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 FAM171A1Q5VUB5 890 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 RESP18Q5W5W9 173 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 TMEM130Q8N3G9 435 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 LNX1Q8TBB1 728 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 C18orf25Q96B23 403 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 UROC1Q96N76 676 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 FGFBP2Q9BYJ0 223 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 TNMDQ9H2S6 317 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 SLC38A7Q9NVC3 462 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 FNIP2Q9P278 1114 aa9.17□□□□□ -0.94
SSBP3-212ENST00000528930 CPSF3Q9UKF6 684 aaKnown RBP9.17□□□□□ -0.94
SSBP3-212ENST00000528930 TEX51A0A1B0GUA7 166 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 LACTBL1A8MY62 500 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PATE3B3GLJ2 98 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PODXLO00592 558 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 OGTO15294 1046 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 POLR2DO15514 142 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ZMYND10O75800 440 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 B3GAT3O94766 335 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 IDEP14735 1019 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 RPL17P18621 184 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 FGFR3P22607 806 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ADSSP30520 456 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 BRCC3P46736 316 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ME1P48163 572 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 CASP5P51878 434 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 NTHL1P78549 312 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 SPAG1Q07617 926 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ELAVL2Q12926 359 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ELF2Q15723 593 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms