RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ASTE1Q2TB18 679 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ADGRD2Q7Z7M1 963 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SPATA2LQ8IUW3 424 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PASD1Q8IV76 773 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 WDTC1Q8N5D0 677 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TTC9BQ8N6N2 239 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GAS2L1Q99501 681 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PCDHB5Q9Y5E4 795 aa12.88□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SSU72P8A0A1W2PR75 194 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 FAM170AA1A519 330 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 M0QYV0 167 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 BEST1O76090 585 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TNFAIP3P21580 790 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CYP2F1P24903 491 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KLRC2P26717 231 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ADCY1Q08828 1119 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 STILQ15468 1287 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TPGS2Q68CL5 300 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 LILRA6Q6PI73 481 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ANKRD52Q8NB46 1076 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MRPL38Q96DV4 380 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 EMILIN2Q9BXX0 1053 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 AFF4Q9UHB7 1163 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ADAMTS1Q9UHI8 967 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
TRAF3IP2-211ENST00000528599 A0A087X0T9 212 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TULP2O00295 520 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TGM5O43548 720 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 AP1G2O75843 785 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SEC24AO95486 1093 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ADH1AP07327 375 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 FAM228BP0C875 321 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ATF2P15336 505 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GPD2P43304 727 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCZ1BP86790 482 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCZ1P86791 482 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PDE4CQ08493 712 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DUSP4Q13115 394 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MTF1Q14872 753 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TMTC1Q8IUR5 882 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 C2orf15Q8WU43 125 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SMARCD1Q96GM5 515 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ZNF830Q96NB3 372 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SMOQ99835 787 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DUSP16Q9BY84 665 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PDCL3Q9H2J4 239 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CYTH4Q9UIA0 394 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 BRWD1Q9NSI6 2320 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PER2O15055 1255 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SOAT2O75908 522 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CYP1A1P04798 512 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 BCAT1P54687 386 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NOMO3P69849 1222 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCDC85BQ15834 202 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PTPROQ16827 1216 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CLEC16AQ2KHT3 1053 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 RBM23Q86U06 439 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SLC35F5Q8WV83 523 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCDC42Q96M95 316 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KCNF1Q9H3M0 494 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SPTLC3Q9NUV7 552 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PTPRDP23468 1912 aa12.86□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ATP8B3O60423 1300 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 AKR1B10O60218 316 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms