RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 APPL2Q8NEU8 664 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 CMASQ8NFW8 434 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 TMEM40Q8WWA1 233 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 NKD2Q969F2 451 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 ARL8AQ96BM9 186 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 LENG1Q96BZ8 264 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 CCDC114Q96M63 670 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 METTL5Q9NRN9 209 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 TUBGCP4Q9UGJ1 667 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 ABT1Q9ULW3 272 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 NEU2Q9Y3R4 380 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 CASP8AP2Q9UKL3 1982 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 LRRD1A4D1F6 860 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 TMEM88BA6NKF7 163 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 LIASO43766 372 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SHOX2O60902 331 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 HUS1O60921 280 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 LRCH4O75427 683 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ITGAVP06756 1048 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 KDELR1P24390 212 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 AKAP5P24588 427 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ACTN2P35609 894 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 GJC1P36383 396 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ADCY8P40145 1251 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ZNF844Q08AG5 666 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SNX1Q13596 522 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 NBPF20Q3BBV1 942 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 BOLA3Q53S33 107 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 PPP1R26Q5T8A7 1209 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 TWF2Q6IBS0 349 aaKnown RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 KDM7AQ6ZMT4 941 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 MAP7D3Q8IWC1 876 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ANKRD52Q8NB46 1076 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SMG8Q8ND04 991 aaKnown RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 JOSD2Q8TAC2 188 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 UBA3Q8TBC4 463 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 SLC35F5Q8WV83 523 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 C18orf25Q96B23 403 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 HSFY1Q96LI6 401 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 MRPL45Q9BRJ2 306 aaKnown RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ROPN1BQ9BZX4 212 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 STMN4Q9H169 189 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 RSAD1Q9HA92 442 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ROPN1Q9HAT0 212 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 ANAPC5Q9UJX4 755 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 HES2Q9Y543 173 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 CDY2AQ9Y6F7 541 aa15.52■□□□□ 0.08
ECHDC1-220ENST00000528402 C2CD4BA6NLJ0 364 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 CABYRO75952 493 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 TRUB2O95900 331 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 PFKMP08237 780 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 WARSP23381 471 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 IVDP26440 423 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 CST5P28325 142 aaPredicted RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 RPL34P49207 117 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 CDR1P51861 262 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 BCAT1P54687 386 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 BST2Q10589 180 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ATP13A4Q4VNC1 1196 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 C6orf118Q5T5N4 469 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 RHBDF2Q6PJF5 856 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 BBS12Q6ZW61 710 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 GSTA5Q7RTV2 222 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 PCGF5Q86SE9 256 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ACOT1Q86TX2 421 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 SERINC5Q86VE9 423 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM228AQ86W67 206 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 RELL1Q8IUW5 271 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 PCSK9Q8NBP7 692 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 SMC1BQ8NDV3 1235 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 TRIB2Q92519 343 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 RAPGEF5Q92565 580 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 TBCBQ99426 244 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 APOL6Q9BWW8 343 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 CAPS2Q9BXY5 557 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 USP18Q9UMW8 372 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 R3HDM2Q9Y2K5 976 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 GIT1Q9Y2X7 761 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 UTRNP46939 3433 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 C3orf70A6NLC5 250 aaPredicted RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 SMAPO00193 183 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 IVLP07476 585 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 PDGFRAP16234 1089 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 HOXD10P28358 340 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 CTGFP29279 349 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 FLT3LGP49771 235 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 RAB27AP51159 221 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 VCPP55072 806 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 SLC8A3P57103 927 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ADCY2Q08462 1091 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ORC1Q13415 861 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 PDK2Q15119 407 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 DAB2IPQ5VWQ8 1189 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 KCTD6Q8NC69 237 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms